Evidence map›Paper›PMID 31116679›Full record

ReviewHuman vaccines & immunotherapeutics2019

What can we learn about influenza infection and vaccination from transcriptomics?

Suchitra Rao, Debashis Ghosh, Edwin J Asturias, Adriana Weinberg

Open access · hybridAbstract readReview
In one paragraph

Review in Human vaccines & immunotherapeutics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Towards personalized vaccines.Frontiers in immunology · 2024
    Review
  2. Article
  3. Review
  4. Gene Expression: the Key to Understanding HIV-1 Infection?Microbiology and molecular biology reviews : MMBR · 2020
    Review
  5. Review
  6. Current Challenges in Vaccinology.Frontiers in immunology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Suchitra RaoDepartment of Pediatrics (Infectious Diseases, Hospital Medicine, Epidemiology), University of Colorado School of Medicine and Children's Hospital Colorado, Aurora, CO, USA.ORCID 0000-0002-0334-6301
Debashis GhoshDepartment of Biostatistics and Informatics, Colorado School of Public Health, Aurora, CO, USA.
Edwin J AsturiasDepartment of Pediatrics (Pediatric Infectious Diseases), University of Colorado School of Medicine and Children's Hospital Colorado and Department of Epidemiology, Center for Global Health, Colorado School of Public Health, Aurora, CO, USA.
Adriana WeinbergDepartment of Medicine, Pathology and Pediatrics, University of Colorado School of Medicine, Aurora, CO, USA.
Colorado School of Public Health · USChildren's Hospital Colorado · USUniversity of Colorado Denver · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transcriptomics studies the set of RNA transcripts produced by the genome using high-throughput sequencing and bioinformatics. This growing field has revolutionized our understanding of host-pathogen interactions, revealing new insights into the host response to influenza infection and vaccination. Studies using transcriptomics have identified a unique immunosignature for influenza discernable from other bacterial and viral pathogens, key transcriptional factors that discriminate early from late, mild versus severe, and symptomatic versus asymptomatic infection. Recent studies evaluating the host response to influenza vaccines have revealed key differences in live versus inactivated influenza vaccines, identified early transcriptional signatures that predict hemagglutinin antibody production following vaccination, increased our understanding of how adjuvants enhance the immune response to influenza vaccine antigens, and demonstrate biologic variability in the response to vaccination due to host factors. These studies demonstrate the potential for influenza transcriptomics to be applied to clinical care, understanding the mechanisms of infection, and informing vaccine development.

Indexed as

Gene Expression ProfilingVaccinationAdjuvants, ImmunologicAntibodies, ViralComputational BiologyHost-Pathogen InteractionsHumansInfluenza, HumanInfluenza VaccinesTranscriptomeAdjuvants, ImmunologicAntibodies, ViralInfluenza Vaccinesbiosignaturesimmune profileInfluenzasystems biologytranscriptomicsvaccination

Identifiers

PMID31116679
PMCPMC6930070
OpenAlexW2946236141

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.