Evidence map›Paper›PMID 31116585›Full record

ArticleAmerican journal of physiology. Cell physiology2019

Disrupted apolipoprotein L1-miR193a axis dedifferentiates podocytes through autophagy blockade in an APOL1 risk milieu.

Vinod Kumar, Kamesh Ayasolla, Alok Jha, Abheepsa Mishra, Himanshu Vashistha, Xiqian Lan, Maleeha Qayyum, Sushma Chinnapaka, Richa Purohit, Joanna Mikulak and 4 more

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Cell physiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 30 citations in OpenAlex.

  1. The ATG14: multi-layer autophagy control and an emerging therapeutic target in cancer.Apoptosis : an international journal on programmed cell death · 2026
    Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Mechanisms and implications of podocyte autophagy in chronic kidney disease.American journal of physiology. Renal physiology · 2024
    Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Transcriptomic Analysis of Human PodocytesKidney international reports · 2023
    Article
  13. Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Autophagy in kidney homeostasis and disease.Nature reviews. Nephrology · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 4 countries.

Vinod KumarFeinstein Institute and Zucker School of Medicine at Hofstra-Northwell , Hempstead, New York.
Kamesh AyasollaFeinstein Institute and Zucker School of Medicine at Hofstra-Northwell , Hempstead, New York.
Alok JhaFeinstein Institute and Zucker School of Medicine at Hofstra-Northwell , Hempstead, New York.
Abheepsa MishraFeinstein Institute and Zucker School of Medicine at Hofstra-Northwell , Hempstead, New York.
Himanshu VashisthaOchsner Clinic , New Orleans, Louisiana.
Xiqian LanFeinstein Institute and Zucker School of Medicine at Hofstra-Northwell , Hempstead, New York.
Maleeha QayyumFeinstein Institute and Zucker School of Medicine at Hofstra-Northwell , Hempstead, New York.
Sushma ChinnapakaFeinstein Institute and Zucker School of Medicine at Hofstra-Northwell , Hempstead, New York.
Richa PurohitFeinstein Institute and Zucker School of Medicine at Hofstra-Northwell , Hempstead, New York.
Joanna MikulakHumanitas Clinical and Research Center, Rozzano, Milan , Italy.
Moin A SaleemAcademic Renal Unit, University of Bristol , Bristol , United Kingdom.
Ashwani MalhotraFeinstein Institute and Zucker School of Medicine at Hofstra-Northwell , Hempstead, New York.
Karl SkoreckiTechnion-Israel Institute of Technology, Rambam Health Care Campus, Haifa , Israel.
Pravin C SinghalFeinstein Institute and Zucker School of Medicine at Hofstra-Northwell , Hempstead, New York.
Humanitas University · ITOchsner Medical Center · USRambam Health Care Campus · ILUniversity of Bristol · GB

Funding

Epigenetic factors and HIV-associated NephropathyR01DK098074 · NIDDK · FEINSTEIN INSTITUTE FOR MEDICAL RESEARCH · PI SINGHAL, PRAVIN C · 2013 to 2016
$2.5M
APOL1 in Diabetic PodocytopathyR01DK118017 · NIDDK · FEINSTEIN INSTITUTE FOR MEDICAL RESEARCH · PI SINGHAL, PRAVIN C · 2018 to 2021
$2.0M
Medical Research Council G0800200Medical Research Council G0800571Medical Research Council MR/L002418/1Medical Research Council MR/P024297/1Medical Research Council MR/R003017/1Medical Research Council MR/R013942/1NIDDK NIH HHS R01 DK098074NIDDK NIH HHS R01 DK118017
6 · The paper itself

Abstract

We hypothesized that a functional apolipoprotein LI (APOL1)-miR193a axis (inverse relationship) preserves, but disruption alters, the podocyte molecular phenotype through the modulation of autophagy flux. Podocyte-expressing APOL1G0 (G0-podocytes) showed downregulation but podocyte-expressing APOL1G1 (G1-podocytes) and APOL1G2 (G2-podocytes) displayed enhanced miR193a expression. G0-, G1-, and G2-podocytes showed enhanced expression of light chain (LC) 3-II and beclin-1, but a disparate expression of p62 (low in wild-type but high in risk alleles). G0-podocytes showed enhanced, whereas G1- and G2-podocytes displayed decreased, phosphorylation of Unc-51-like autophagy-activating kinase (ULK)1 and class III phosphatidylinositol 3-kinase (PI3KC3). Podocytes overexpressing miR193a (miR193a-podocytes), G1, and G2 showed decreased transcription of PIK3R3 (PI3KC3's regulatory unit). Since 3-methyladenine (3-MA) enhanced miR193a expression but inhibited PIK3R3 transcription, it appears that 3-MA inhibits autophagy and induces podocyte dedifferentiation via miR193a generation. miR193a-, G1-, and G2-podocytes also showed decreased phosphorylation of mammalian target of rapamycin (mTOR) that could repress lysosome reformation. G1- and G2-podocytes showed enhanced expression of run domain beclin-1-interacting and cysteine-rich domain-containing protein (Rubicon); however, its silencing prevented their dedifferentiation. Docking, protein-protein interaction, and immunoprecipitation studies with antiautophagy-related gene (ATG)14L, anti-UV radiation resistance-associated gene (UVRAG), or Rubicon antibodies suggested the formation of ATG14L complex I and UVRAG complex II in G0-podocytes and the formation of Rubicon complex III in G1- and G2-podocytes. These findings suggest that the APOL1 risk alleles favor podocyte dedifferentiation through blockade of multiple autophagy pathways.

Indexed as

AutophagyCell DedifferentiationAdaptor Proteins, Vesicular TransportApolipoprotein L1AutophagosomesAutophagy-Related ProteinsCell Line, TransformedGene Expression RegulationHumansMicroRNAsMolecular Dynamics SimulationPhenotypePhosphatidylinositol 3-KinasesPodocytesProtein Interaction MapsSignal TransductionAdaptor Proteins, Vesicular TransportAPOL1 protein, humanApolipoprotein L1ATG14 protein, humanAutophagy-Related ProteinsMicroRNAsMIRN193 microRNA, humanPhosphatidylinositol 3-KinasesPIK3R3 protein, humanRUBCN protein, humanTumor Suppressor ProteinsUVRAG protein, humanAPOL1autophagydedifferentiation of podocytesmiR193apodocytes

Identifiers

PMID31116585
PMCPMC6732421
OpenAlexW2945628975

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.