Evidence map›Paper›PMID 31114558›Full record

ArticleFrontiers in microbiology2019

Bacterioplankton Community Composition Along Environmental Gradients in Lakes From Byers Peninsula (Maritime Antarctica) as Determined by Next-Generation Sequencing.

Antonio Picazo, Carlos Rochera, Juan Antonio Villaescusa, Javier Miralles-Lorenzo, David Velázquez, Antonio Quesada, Antonio Camacho

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  12. Molecular Diagnostic Tools Applied for Assessing Microbial Water Quality.International journal of environmental research and public health · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Antonio PicazoCavanilles Institute for Biodiversity and Evolutionary Biology, University of Valencia, Valencia, Spain.
Carlos RocheraCavanilles Institute for Biodiversity and Evolutionary Biology, University of Valencia, Valencia, Spain.
Juan Antonio VillaescusaCavanilles Institute for Biodiversity and Evolutionary Biology, University of Valencia, Valencia, Spain.
Javier Miralles-LorenzoCavanilles Institute for Biodiversity and Evolutionary Biology, University of Valencia, Valencia, Spain.
David VelázquezDepartamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid, Spain.
Antonio QuesadaDepartamento de Biología, Facultad de Ciencias, Universidad Autónoma de Madrid, Madrid, Spain.
Antonio CamachoCavanilles Institute for Biodiversity and Evolutionary Biology, University of Valencia, Valencia, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study comprises the first attempt to describe the planktonic bacterial communities of lakes from Byers Peninsula, one of the most significant limnological districts in the Maritime Antarctica, leveraging next-generation sequencing (NGS) technologies. For the survey, we selected 7 lakes covering the environmental gradient from inland to coastal lakes, some of them sampled both in surface and deep waters. Analysis provided just over 85,000 high quality sequences that were clustered into 864 unique Zero-radius Operational Taxonomic Units (ZOTUs) (i.e., 100% sequence similarity). Yet, several taxonomic uncertainties remained in the analysis likely suggesting the occurrence of local bacterial adaptations. The survey showed the dominance of the phyla Proteobacteria and Bacteroidetes. Among the former, the Gammaproteobacteria class, more specifically the order Betaproteobacteriales, was the dominant group, which seems to be a common trend in nutrient-limited Antarctic lakes. Most of the families and genera ubiquitously detected belonging to this class are indeed typical from ultra-oligotrophic environments, and commonly described as diazotrophs. On the other hand, among the members of the phylum Bacteroidetes, genera such as

Indexed as

bacterioplanktonByers Peninsulaenvironmental gradientsMaritime Antarctic lakesnext-generation sequencing

Identifiers

PMID31114558
PMCPMC6503055

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.