Evidence map›Paper›PMID 31114014›Full record

ArticleScientific reports2019

Down-regulation of GATA1-dependent erythrocyte-related genes in the spleens of mice exposed to a space travel.

Kenta Horie, Hiroki Sasanuma, Takashi Kudo, Shin-Ichiro Fujita, Maki Miyauchi, Takahisa Miyao, Takao Seki, Nobuko Akiyama, Yuki Takakura, Miki Shimbo and 7 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  5. Infection vs. Reinfection: The Immunomodulation of Erythropoiesis.International journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Kenta HorieRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
Hiroki SasanumaLaboratory of Developmental Genetics, Institute of Medical Science, The University of Tokyo, Tokyo, 108-8639, Japan.
Takashi KudoMouse Epigenetics Project, ISS/Kibo experiment, Japan Aerospace Exploration Agency (JAXA), Ibaraki, 305-8505, Japan.
Shin-Ichiro FujitaMouse Epigenetics Project, ISS/Kibo experiment, Japan Aerospace Exploration Agency (JAXA), Ibaraki, 305-8505, Japan.
Maki MiyauchiRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
Takahisa MiyaoRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
Takao SekiRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
Nobuko AkiyamaRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
Yuki TakakuraRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan.
Miki ShimboMouse Epigenetics Project, ISS/Kibo experiment, Japan Aerospace Exploration Agency (JAXA), Ibaraki, 305-8505, Japan.
Hyojung JeonMouse Epigenetics Project, ISS/Kibo experiment, Japan Aerospace Exploration Agency (JAXA), Ibaraki, 305-8505, Japan.
Masaki ShirakawaMouse Epigenetics Project, ISS/Kibo experiment, Japan Aerospace Exploration Agency (JAXA), Ibaraki, 305-8505, Japan.
Dai ShibaMouse Epigenetics Project, ISS/Kibo experiment, Japan Aerospace Exploration Agency (JAXA), Ibaraki, 305-8505, Japan.
Nobuaki YoshidaLaboratory of Developmental Genetics, Institute of Medical Science, The University of Tokyo, Tokyo, 108-8639, Japan.
Masafumi MurataniMouse Epigenetics Project, ISS/Kibo experiment, Japan Aerospace Exploration Agency (JAXA), Ibaraki, 305-8505, Japan.ORCID http://orcid.org/0000-0002-0276-8000
Satoru TakahashiMouse Epigenetics Project, ISS/Kibo experiment, Japan Aerospace Exploration Agency (JAXA), Ibaraki, 305-8505, Japan.ORCID http://orcid.org/0000-0002-8540-7760
Taishin AkiyamaRIKEN Center for Integrative Medical Sciences, Yokohama, 230-0045, Japan. taishin.akiyama@riken.jp.
RIKEN Center for Integrative Medical Sciences · JPUniversity of Tsukuba · JPJapan Aerospace Exploration Agency · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Secondary lymphoid organs are critical for regulating acquired immune responses. The aim of this study was to characterize the impact of spaceflight on secondary lymphoid organs at the molecular level. We analysed the spleens and lymph nodes from mice flown aboard the International Space Station (ISS) in orbit for 35 days, as part of a Japan Aerospace Exploration Agency mission. During flight, half of the mice were exposed to 1 g by centrifuging in the ISS, to provide information regarding the effect of microgravity and 1 g exposure during spaceflight. Whole-transcript cDNA sequencing (RNA-Seq) analysis of the spleen suggested that erythrocyte-related genes regulated by the transcription factor GATA1 were significantly down-regulated in ISS-flown vs. ground control mice. GATA1 and Tal1 (regulators of erythropoiesis) mRNA expression was consistently reduced by approximately half. These reductions were not completely alleviated by 1 g exposure in the ISS, suggesting that the combined effect of space environments aside from microgravity could down-regulate gene expression in the spleen. Additionally, plasma immunoglobulin concentrations were slightly altered in ISS-flown mice. Overall, our data suggest that spaceflight might disturb the homeostatic gene expression of the spleen through a combination of microgravity and other environmental changes.

Indexed as

Space FlightTranscriptomeAnimalsDown-RegulationErythropoiesisGATA1 Transcription FactorMiceSpleenT-Cell Acute Lymphocytic Leukemia Protein 1WeightlessnessGata1 protein, mouseGATA1 Transcription FactorTal1 protein, mouseT-Cell Acute Lymphocytic Leukemia Protein 1

Identifiers

PMID31114014
PMCPMC6529412
OpenAlexW2946822279

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.