Evidence map›Paper›PMID 31113963›Full record

ArticleScientific reports2019

Hair Proteome Variation at Different Body Locations on Genetically Variant Peptide Detection for Protein-Based Human Identification.

Fanny Chu, Katelyn E Mason, Deon S Anex, A Daniel Jones, Bradley R Hart

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Review
  3. Human hair as a diagnostic tool in medicine.Biochemistry and biophysics reports · 2025
    Review
  4. DNA and protein analyses of hair in forensic genetics.International journal of legal medicine · 2023
    Review
  5. Article
  6. Paleoproteomics.Chemical reviews · 2022
    Review
  7. Review
  8. Identifying individuals using proteomics: are we there yet?Frontiers in molecular biosciences · 2022
    Review
  9. Review
  10. Hijacking Sexual Immuno-Privilege in GBM-An Immuno-Evasion Strategy.International journal of molecular sciences · 2021
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Fanny ChuForensic Science Center, Lawrence Livermore National Laboratory, 7000 East Ave., Livermore, CA, 94550, USA.
Katelyn E MasonForensic Science Center, Lawrence Livermore National Laboratory, 7000 East Ave., Livermore, CA, 94550, USA.
Deon S AnexForensic Science Center, Lawrence Livermore National Laboratory, 7000 East Ave., Livermore, CA, 94550, USA. anex1@llnl.gov.ORCID http://orcid.org/0000-0002-3491-9379
A Daniel JonesDepartment of Chemistry, Michigan State University, 578 S Shaw Ln, East Lansing, MI, 48824, USA.ORCID http://orcid.org/0000-0002-7408-6690
Bradley R HartForensic Science Center, Lawrence Livermore National Laboratory, 7000 East Ave., Livermore, CA, 94550, USA.
Lawrence Livermore National Laboratory · USMichigan State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human hair contains minimal intact nuclear DNA for human identification in forensic and archaeological applications. In contrast, proteins offer a pathway to exploit hair evidence for human identification owing to their persistence, abundance, and derivation from DNA. Individualizing single nucleotide polymorphisms (SNPs) are often conserved as single amino acid polymorphisms in genetically variant peptides (GVPs). Detection of GVP markers in the hair proteome via high-resolution tandem mass spectrometry permits inference of SNPs with known statistical probabilities. To adopt this approach for forensic investigations, hair proteomic variation and its effects on GVP identification must first be characterized. This research aimed to assess variation in single-inch head, arm, and pubic hair, and discover body location-invariant GVP markers to distinguish individuals. Comparison of protein profiles revealed greater body location-specific variation in keratin-associated proteins and intracellular proteins, allowing body location differentiation. However, robust GVP markers derive primarily from keratins that do not exhibit body location-specific differential expression, supporting GVP identification independence from hair proteomic variation at the various body locations. Further, pairwise comparisons of GVP profiles with 8 SNPs demonstrated greatest interindividual variation and high intraindividual consistency, enabling similar differentiative potential of individuals using single hairs irrespective of body location origin.

Indexed as

Polymorphism, Single NucleotideAdultForensic AnthropologyForensic GeneticsHairHumansKeratinsPeptidesProteomeKeratinsPeptidesProteome

Identifiers

PMID31113963
PMCPMC6529471
OpenAlexW2945140456

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.