Evidence map›Paper›PMID 31113901›Full record

ArticlemBio2019

The Synthetic Phenotype of Δ

Elizabeth M Hart, Meera Gupta, Martin Wühr, Thomas J Silhavy

Open access · goldAbstract read
In one paragraph

Article in mBio, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. A mechanism for substrate quality control in outer membrane protein assembly.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Bacterial warfare at the molecular level:Current research in microbial sciences · 2026
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. The sacrificial adaptor protein Skp functions to remove stalled substrates from the β-barrel assembly machine.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  14. High-throughput suppressor screen demonstrates that RcsF monitors outer membrane integrity and not Bam complex function.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Article
  16. TheInternational journal of molecular sciences · 2021
    Article
  17. Article
  18. The gain-of-function alleleProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Elizabeth M HartDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, USA.
Meera GuptaDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, USA.
Martin WührDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, USA wuhr@princeton.edu tsilhavy@princeton.edu.
Thomas J SilhavyDepartment of Molecular Biology, Princeton University, Princeton, New Jersey, USA wuhr@princeton.edu tsilhavy@princeton.edu.
Princeton University · US

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007388 · NIGMS · PRINCETON UNIVERSITY · PI CRISTEA, ILEANA M. · 1985 to 2022
$27.4M
Biogenesis and maintenance of the outer membrane of Gram-negative bacteriaR35GM118024 · NIGMS · PRINCETON UNIVERSITY · PI SILHAVY, THOMAS J. · 2016 to 2025
$8.1M
GENETIC ANALYSIS OF PROTEIN EXPORTR01GM034821 · NIGMS · PRINCETON UNIVERSITY · PI SILHAVY, THOMAS J. · 1985 to 2015
$4.7M
Development of New Proteomics Technology and its Application to Study Cellular OrganizationR35GM128813 · NIGMS · PRINCETON UNIVERSITY · PI Martin Wühr · 2018 to 2026
$4.0M
Investigating the mycomembrane protein assembly pathwayK99AI190054 · NIAID · HARVARD MEDICAL SCHOOL · PI Elizabeth Mary Hart · 2025 to 2026
$227k
The of Role DNA LigIV and Its Accessory Factors in the NHEJ Synaptic ComplexF32GM129913 · NIGMS · HARVARD MEDICAL SCHOOL · PI CARNEY, SEAN MICHAEL · 2018 to 2019
$123k
NIAID NIH HHS K99 AI190054NIGMS NIH HHS F32 GM129913NIGMS NIH HHS R01 GM034821NIGMS NIH HHS R35 GM118024NIGMS NIH HHS R35 GM128813NIGMS NIH HHS T32 GM007388
6 · The paper itself

Abstract

The selective permeability of the Gram-negative outer membrane (OM) is maintained by integral β-barrel outer membrane proteins (OMPs). The heteropentomeric β-barrel assembly machine (Bam) folds and inserts OMPs into the OM. Coordination of the essential proteins BamA and BamD is critical for OMP assembly and therefore the viability of the cell. The role of the nonessential lipoproteins BamBCE has yet to be characterized; however, genetic evidence suggests that they have nonoverlapping roles in OMP assembly. In this work, we quantify changes of the proteome in the conditional lethal Δ

Indexed as

Protein MultimerizationBacterial Outer Membrane ProteinsEscherichia coliEscherichia coli ProteinsGene DeletionLipoproteinsMicrobial ViabilityBacterial Outer Membrane ProteinsBamB protein, E coliBamE protein, E coliEscherichia coli ProteinsLipoproteinsrcsF protein, E colibacterial geneticsBam complexEscherichia coliOMP assemblyouter membrane biogenesisRcsFRcs stress response

Identifiers

PMID31113901
PMCPMC6529638
OpenAlexW2946681606

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.