Evidence map›Paper›PMID 31113370›Full record

ArticleBMC microbiology2019

Biological and transcriptomic studies reveal hfq is required for swimming, biofilm formation and stress response in Xanthomonas axonpodis pv. citri.

Xuelu Liu, Yuping Yan, Haodi Wu, Changyong Zhou, Xuefeng Wang

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in BMC microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
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  4. Frontiers in microbiology · 2022
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  5. Microbiology and molecular biology reviews : MMBR · 2021
    Review
  6. Secrete or perish: The role of secretion systems inComputational and structural biotechnology journal · 2021
    Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xuelu LiuNational Engineering Research Center for Citrus, Citrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing, 400712, People's Republic of China.
Yuping YanNational Engineering Research Center for Citrus, Citrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing, 400712, People's Republic of China.
Haodi WuNational Engineering Research Center for Citrus, Citrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing, 400712, People's Republic of China.
Changyong ZhouNational Engineering Research Center for Citrus, Citrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing, 400712, People's Republic of China.
Xuefeng WangNational Engineering Research Center for Citrus, Citrus Research Institute, Southwest University/Chinese Academy of Agricultural Sciences, Chongqing, 400712, People's Republic of China. wangxuefeng@cric.cn.ORCID 0000-0002-9293-3427
Southwest University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHfq is a widely conserved bacterial RNA-binding protein which generally mediates the global regulatory activities involv ed in physiological process and virulence. The goal of this study was to characterize the biological function of hfq gene in Xanthomonas axonpodis pv. citri (Xac), the causal agent of citrus canker disease.

resultsAn hfq mutant in Xac was generated by plasmid integration. The loss of hfq resulted in attenuation of bacterial growth, motility and biofilm formation. In addition, the hfq mutation impaired Xac resistance to H

conclusionsThe study demonstrated that hfq was involved in multiple biological processes in Xac. The results could serve as initiate points for identifying regulatory sRNAs and genes controlled by Hfq-sRNA interactions in Xac.

Indexed as

MutationBacterial ProteinsBiofilmsGene Expression ProfilingGene Expression Regulation, BacterialHost Factor 1 ProteinPlant DiseasesQuorum SensingSequence Analysis, RNAXanthomonas axonopodisBacterial ProteinsHost Factor 1 ProteinBiofilmhfq geneXanthomonas axonpodis pv. citriXanthomonas citri subsp. citri

Identifiers

PMID31113370
PMCPMC6530196
OpenAlexW2945944274

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.