Evidence map›Paper›PMID 31113298›Full record

ArticleNeural computation2019

Characterizing Brain Connectivity From Human Electrocorticography Recordings With Unobserved Inputs During Epileptic Seizures.

Anup Das, Daniel Sexton, Claudia Lainscsek, Sydney S Cash, Terrence J Sejnowski

Open access · greenAbstract read
In one paragraph

Article in Neural computation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
  2. Article
  3. Time-evolving controllability of effective connectivity networks during seizure progression.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  4. Heterogeneity of Preictal Dynamics in Human Epileptic Seizures.IEEE access : practical innovations, open solutions · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Anup DasDepartment of Psychiatry and Behavioral Sciences, Stanford University School of Medicine, Stanford University, Stanford, CA 94305, and Computational Neurobiology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, U.S.A. aldas@stanford.edu.
Daniel SextonComputational Neurobiology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, U.S.A. daniel.sexton16@gmail.com.
Claudia LainscsekComputational Neurobiology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, U.S.A. claudia@salk.edu.
Sydney S CashDepartment of Neurology, Massachusetts General Hospital, Boston, MA 02114, and Harvard Medical School, Boston, MA 02115, U.S.A. scash@mgh.harvard.edu.
Terrence J SejnowskiDivision of Biological Sciences and Institute of Neural Computation, University of California, San Diego, La Jolla, CA 92093, and Howard Hughes Medical Institute, Salk Institute for Biological Studies, La Jolla, CA 92037, U.S.A. terry@salk.edu.
Salk Institute for Biological Studies · USMassachusetts General Hospital · USStanford University · US

Funding

CRCNS: Integrated Empirical and Multiscale Modeling of Human Sleep SpindlesR01EB009282 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SEJNOWSKI, TERRENCE J · 2008 to 2016
$3.7M
DDALAB: Identifying Latent States from Neural Recordings with Nonlinear Causal AnalysisRF1MH132664 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SEJNOWSKI, TERRENCE J · 2023 to 2023
$1.2M
Nonlinear Causal Analysis of Neural SignalsR01EB026899 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SEJNOWSKI, TERRENCE J · 2018 to 2020
$1.0M
NIBIB NIH HHS R01 EB009282NIBIB NIH HHS R01 EB026899NIMH NIH HHS RF1 MH132664
6 · The paper itself

Abstract

Epilepsy is a neurological disorder characterized by the sudden occurrence of unprovoked seizures. There is extensive evidence of significantly altered brain connectivity during seizure periods in the human brain. Research on analyzing human brain functional connectivity during epileptic seizures has been limited predominantly to the use of the correlation method. However, spurious connectivity can be measured between two brain regions without having direct connection or interaction between them. Correlations can be due to the apparent interactions of the two brain regions resulting from common input from a third region, which may or may not be observed. Hence, researchers have recently proposed a sparse-plus-latent-regularized precision matrix (SLRPM) when there are unobserved or latent regions interacting with the observed regions. The SLRPM method yields partial correlations of the conditional statistics of the observed regions given the latent regions, thus identifying observed regions that are conditionally independent of both the observed and latent regions. We evaluate the performance of the methods using a spring-mass artificial network and assuming that some nodes cannot be observed, thus constituting the latent variables in the example. Several cases have been considered, including both sparse and dense connections, short-range and long-range connections, and a varying number of latent variables. The SLRPM method is then applied to estimate brain connectivity during epileptic seizures from human ECoG recordings. Seventy-four clinical seizures from five patients, all having complex partial epilepsy, were analyzed using SLRPM, and brain connectivity was quantified using modularity index, clustering coefficient, and eigenvector centrality. Furthermore, using a measure of latent inputs estimated by the SLRPM method, it was possible to automatically detect 72 of the 74 seizures with four false positives and find six seizures that were not marked manually.

Indexed as

ElectrocorticographyAdultBrainBrain MappingElectroencephalographyEpilepsyFemaleHumansMaleMiddle AgedSeizures

Identifiers

PMID31113298
PMCPMC7155929
OpenAlexW2946558371

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.