Evidence map›Paper›PMID 31110686›Full record

ArticleEcology and evolution2019

The use of DNA barcodes to estimate phylogenetic diversity in forest communities of southern China.

Jiajia Liu, Juan Liu, You-Xia Shan, Xue-Jun Ge, Kevin S Burgess

Abstract read
In one paragraph

Article in Ecology and evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jiajia LiuKey Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden The Chinese Academy of Sciences Guangzhou China.ORCID https://orcid.org/0000-0002-9778-060X
Juan LiuCollaborative Innovation Center of Jiangxi Typical Trees Cultivation and Utilization Jiangxi Agriculture University Nanchang China.
You-Xia ShanKey Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden The Chinese Academy of Sciences Guangzhou China.ORCID https://orcid.org/0000-0002-6417-4777
Xue-Jun GeKey Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical Garden The Chinese Academy of Sciences Guangzhou China.ORCID https://orcid.org/0000-0002-5008-9475
Kevin S BurgessDepartment of Biology, College of Letters and Sciences Columbus State University, University System of Georgia Columbus Georgia.ORCID https://orcid.org/0000-0002-9663-9428

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To elucidate potential ecological and evolutionary processes associated with the assembly of plant communities, there is now widespread use of estimates of phylogenetic diversity that are based on a variety of DNA barcode regions and phylogenetic construction methods. However, relatively few studies consider how estimates of phylogenetic diversity may be influenced by single DNA barcodes incorporated into a sequence matrix (conservative regions vs. hypervariable regions) and the use of a backbone family-level phylogeny. Here, we use general linear mixed-effects models to examine the influence of different combinations of core DNA barcodes (

Indexed as

Bayesian treeITSmatKphylogenetic inferencerbcLsubtropical forest

Identifiers

PMID31110686
PMCPMC6509380

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.