ArticleThe Plant journal : for cell and molecular biology2019
Exome sequences and multi-environment field trials elucidate the genetic basis of adaptation in barley.
Article in The Plant journal : for cell and molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.
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Who cites it
37 citing papers in PubMed, 1 synthesis or guideline pooled it.
- New loci and candidate genes in spring two-rowed barley detected through meta-analysis of a field trial European network.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Pooled it
- Genetic dissection of root traits in barley identifies major QTLs and domestication signature.Plant cell reports · 2026Article
- Striking convergent selection history of wheat and barley and its potential for breeding.Nature plants · 2025Article
- Rainfall patterns during barley seed development underlie genomic variation for germination after flooding.Plant physiology · 2025Article
- On the origin of the late-flowering ppd-H1 allele in barley.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- The putative endo-1,4-β-D-glucanase GLU3 regulates cellulose biosynthesis in barley roots.Plant physiology · 2025Article
- Multi-population GWAS detects robust marker associations in a newly established six-rowed winter barley breeding program.Heredity · 2025Article
- Variation at the major facilitator superfamilyFrontiers in plant science · 2025Article
- Genetic erosion in domesticated barley and a hypothesis of a North African centre of diversity.Ecology and evolution · 2024Article
- A GDSL-motif Esterase/Lipase Affects Wax and Cutin Deposition and Controls Hull-Caryopsis Attachment in Barley.Plant & cell physiology · 2024Article
- Genomic and phenotypic characterization of finger millet indicates a complex diversification history.The plant genome · 2024Article
- early maturity 7 promotes early flowering by controlling the light input into the circadian clock in barley.Plant physiology · 2024Article
- Dynamics of apex and leaf development in barley as affected byFrontiers in plant science · 2024Article
- Unlocking the genetic diversity and population structure of the newly introduced two-row spring European HerItage Barley collecTion (ExHIBiT).Frontiers in plant science · 2024Article
- Modeling QTL-by-environment interactions for multi-parent populations.Frontiers in plant science · 2024Article
- Understanding and applying biological resilience, from genes to ecosystems.npj biodiversity · 2023Review
- Use of GWAS analysis in deciphering the inability of barley seeds to germinate after hypoxia.Journal of experimental botany · 2023Article
- Genome-wide identification, expression pattern and genetic variation analysis ofFrontiers in plant science · 2023Article
- Conserved signalling components coordinate epidermal patterning and cuticle deposition in barley.Nature communications · 2022Article
- Multi-locus genome-wide association studies reveal novel alleles for flowering time under vernalisation and extended photoperiod in a barley MAGIC population.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Article
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Authors and funding
27 authors.
Funding
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Abstract
Broadening the genetic base of crops is crucial for developing varieties to respond to global agricultural challenges such as climate change. Here, we analysed a diverse panel of 371 domesticated lines of the model crop barley to explore the genetics of crop adaptation. We first collected exome sequence data and phenotypes of key life history traits from contrasting multi-environment common garden trials. Then we applied refined statistical methods, including some based on exomic haplotype states, for genotype-by-environment (G×E) modelling. Sub-populations defined from exomic profiles were coincident with barley's biology, geography and history, and explained a high proportion of trial phenotypic variance. Clear G×E interactions indicated adaptation profiles that varied for landraces and cultivars. Exploration of circadian clock-related genes, associated with the environmentally adaptive days to heading trait (crucial for the crop's spread from the Fertile Crescent), illustrated complexities in G×E effect directions, and the importance of latitudinally based genic context in the expression of large-effect alleles. Our analysis supports a gene-level scientific understanding of crop adaption and leads to practical opportunities for crop improvement, allowing the prioritisation of genomic regions and particular sets of lines for breeding efforts seeking to cope with climate change and other stresses.
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