Evidence map›Paper›PMID 31107959›Full record

ArticleHuman molecular genetics2019

Motor neurons from ALS patients with mutations in C9ORF72 and SOD1 exhibit distinct transcriptional landscapes.

Ching-On Wong, Kartik Venkatachalam

Open access · greenAbstract read
In one paragraph

Article in Human molecular genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Dynamic changes in excitability and viability of sporadic andFrontiers in cell and developmental biology · 2026
    Article
  3. Extracellular Matrix Remodeling in Motor Neuron Diseases.International journal of molecular sciences · 2025
    Review
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  9. Knockdown ofFrontiers in cellular neuroscience · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ching-On WongDepartment of Integrative Biology and Pharmacology, McGovern Medical School at the University of Texas Health Sciences Center (UTHealth), Houston, TX 77030, USA.
Kartik VenkatachalamDepartment of Integrative Biology and Pharmacology, McGovern Medical School at the University of Texas Health Sciences Center (UTHealth), Houston, TX 77030, USA.
The University of Texas MD Anderson Cancer Center · US

Funding

Alterations in synaptic growth and lipid-raft organization in a fly MLIV modelR01NS081301 · NINDS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI VENKATACHALAM, KARTIK · 2014 to 2018
$1.7M
Modulation of mitochondrial proliferation and function in Drosophila neuronsR21AG061646 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI SARDIELLO, MARCO, VENKATACHALAM, KARTIK · 2018 to 2019
$443k
NIA NIH HHS R21 AG061646NINDS NIH HHS R01 NS081301
6 · The paper itself

Abstract

Amyotrophic lateral sclerosis (ALS) is a progressive motor neuron disease that culminates in paralysis and death. Here, we present our analyses of publicly available multiOMIC data sets generated using motor neurons from ALS patients and control cohorts. Functional annotation of differentially expressed genes in induced pluripotent stem cell (iPSC)-derived motor neurons generated from patients with mutations in C9ORF72 (C9-ALS) suggests elevated expression of genes that pertain to extracellular matrix (ECM) and cell adhesion, inflammation and TGFβ targets. On the other end of the continuum, we detected diminished expression of genes repressed by quiescence-promoting E2F4/DREAM complex. Proteins whose abundance was significantly altered in C9-ALS neurons faithfully recapitulated the transcriptional aberrations. Importantly, patterns of gene expression in spinal motor neurons dissected from C9-ALS or sporadic ALS patients were highly concordant with each other and with the C9-ALS iPSC neurons. In contrast, motor neurons from patients with mutations in SOD1 exhibited dramatically different signatures. Elevated expression of gene sets such as ECM and cell adhesion genes occurs in C9 and sporadic ALS but not SOD1-ALS. These analyses indicate that despite the similarities in outward manifestations, transcriptional and proteomic signatures in ALS motor neurons can vary significantly depending on the identity of the causal mutations.

Indexed as

MutationTranscription, GeneticAmyotrophic Lateral SclerosisC9orf72 ProteinComputational BiologyGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHumansInduced Pluripotent Stem CellsModels, BiologicalMotor NeuronsProteomicsSuperoxide Dismutase-1C9orf72 ProteinC9orf72 protein, humanSOD1 protein, humanSuperoxide Dismutase-1

Identifiers

PMID31107959
PMCPMC6687950
OpenAlexW2946643793

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.