ArticleEnvironmental microbiology2019
Metagenomic recovery of two distinct comammox Nitrospira from the terrestrial subsurface.
Article in Environmental microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
29 citing papers in PubMed, 91 citations in OpenAlex.
- Unique characteristics of acid-tolerant comammox bacteria revealed by multi-omics analyses.ISME communications · 2026Article
- Unique phylogenies and metabolic adaptations of novel lineage III and comammoxISME communications · 2026Article
- Comparative genome analysis reveals broad phylogenetic and functional diversity within the order Nitrospirales.The ISME journal · 2025Article
- Acid tolerance and metabolic potential of comammox and nitrite-oxidizingISME communications · 2025Article
- ComammoxApplied and environmental microbiology · 2024Article
- Metatranscriptomic Analysis Reveals Synergistic Activities of Comammox and Anammox Bacteria in Full-Scale Attached Growth Nitrogen Removal System.Environmental science & technology · 2024Article
- Transcriptome analysis of the degradation process of organic nitrogen by two heterotrophic nitrifying and aerobic denitrifying bacteria.Archives of microbiology · 2024Article
- Nitrogen source influences the interactions of comammox bacteria with aerobic nitrifiers.Microbiology spectrum · 2024Article
- Unveiling unique microbial nitrogen cycling and nitrification driver in coastal Antarctica.Nature communications · 2024Article
- Implications for nitrogen and sulphur cycles: phylogeny and niche-range ofISME communications · 2024Article
- Differential contribution of nitrifying prokaryotes to groundwater nitrification.The ISME journal · 2023Article
- Hot spring distribution and survival mechanisms of thermophilic comammox Nitrospira.The ISME journal · 2023Article
- Schizotrophic Sclerotinia sclerotiorum-Mediated Root and Rhizosphere Microbiome Alterations Activate Growth and Disease Resistance in Wheat.Microbiology spectrum · 2023Article
- Replicated life-history patterns and subsurface origins of the bacterial sister phyla Nitrospirota and Nitrospinota.The ISME journal · 2023Article
- Ecological distribution and function of comammox Nitrospira in the environment.Applied microbiology and biotechnology · 2023Review
- ComammoxApplied and environmental microbiology · 2023Article
- Differential responses of canonical nitrifiers and comammoxFrontiers in microbiology · 2023Article
- Nitrogen cycling and microbial cooperation in the terrestrial subsurface.The ISME journal · 2022Article
- ComammoxFrontiers in microbiology · 2022Article
- Metagenomic approaches reveal differences in genetic diversity and relative abundance of nitrifying bacteria and archaea in contrasting soils.Scientific reports · 2021Article
Corrections and comments
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Authors and funding
8 authors at 2 institutions in 2 countries.
Funding
Abstract
The recently discovered comammox process encompasses both nitrification steps, the aerobic oxidation of ammonia and nitrite, in a single organism. All known comammox bacteria are affiliated with Nitrospira sublineage II and can be grouped into two distinct clades, referred to as A and B, based on ammonia monooxygenase phylogeny. In this study, we report high-quality draft genomes of two novel comammox Nitrospira from the terrestrial subsurface, representing one clade A and one clade B comammox organism. The two metagenome-assembled genomes were compared with other representatives of Nitrospira sublineage II, including both canonical and comammox Nitrospira. Phylogenomic analyses confirmed the affiliation of the two novel Nitrospira with comammox clades A and B respectively. Based on phylogenetic distance and pairwise average nucleotide identity values, both comammox Nitrospira were classified as novel species. Genomic comparison revealed high conservation of key metabolic features in sublineage II Nitrospira, including respiratory complexes I-V and the machineries for nitrite oxidation and carbon fixation via the reductive tricarboxylic acid cycle. In addition, the presence of the enzymatic repertoire for formate and hydrogen oxidation in the Rifle clades A and B comammox genomes, respectively, suggest a broader distribution of these metabolic features than previously anticipated.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.