Evidence map›Paper›PMID 31106942›Full record

ArticleHuman brain mapping2019

Fetal cortical surface atlas parcellation based on growth patterns.

Jing Xia, Fan Wang, Oualid M Benkarim, Gerard Sanroma, Gemma Piella, Miguel A González Ballester, Nadine Hahner, Elisenda Eixarch, Caiming Zhang, Dinggang Shen and 1 more

Abstract read
In one paragraph

Article in Human brain mapping, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. MRI-based spatio-temporal atlas of ganglionic eminence.European radiology experimental · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Molecular signatures of cortical expansion in the human fetal brain.bioRxiv : the preprint server for biology · 2024
    Article
  9. Article
  10. Mapping Genetic Topography of Cortical Thickness and Surface Area in Neonatal Brains.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  11. Longitudinal mapping of the development of cortical thickness and surface area in rhesus macaques during the first three years.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Review
  14. Article
  15. GEOMETRIC CONSTRAINED DEEP LEARNING FOR MOTION CORRECTION OF FETAL BRAIN MR IMAGES.Proceedings. IEEE International Symposium on Biomedical Imaging · 2023
    Article
  16. Article
  17. Spatiotemporal Atlas of the Fetal Brain Depicts Cortical Developmental Gradient.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  18. Mapping developmental regionalization and patterns of cortical surface area from 29 post-menstrual weeks to 2 years of age.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Anatomy-Guided Convolutional Neural Network for Motion Correction in Fetal Brain MRI.Machine learning in medical imaging. MLMI (Workshop) · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jing XiaDepartment of Computer Science and Technology, Shandong University, Shandong, China.ORCID 0000-0003-4962-2604
Fan WangDepartment of Radiology and BRIC, University of North Carolina at Chapel Hill, Chapel Hills, North Carolina.
Oualid M BenkarimBCN Medtech, Universitat Pompeu Fabra, Barcelona, Spain.ORCID 0000-0003-3922-7643
Gerard SanromaBCN Medtech, Universitat Pompeu Fabra, Barcelona, Spain.
Gemma PiellaBCN Medtech, Universitat Pompeu Fabra, Barcelona, Spain.
Miguel A González BallesterBCN Medtech, Universitat Pompeu Fabra, Barcelona, Spain.
Nadine HahnerFetal i+D Fetal Medicine Research Center, BCNatal, Barcelona Center for Maternal-Fetal and Neonatal Medicine (Hospital Clínic and Hospital Sant Joan de Déu), Institut Clínic de Ginecologia, Obstetricia i Neonatologia, Institut d'Investigacions Biomèdiques August Pi i Sunyer, Universitat de Barcelona, Barcelona, Spain.
Elisenda EixarchFetal i+D Fetal Medicine Research Center, BCNatal, Barcelona Center for Maternal-Fetal and Neonatal Medicine (Hospital Clínic and Hospital Sant Joan de Déu), Institut Clínic de Ginecologia, Obstetricia i Neonatologia, Institut d'Investigacions Biomèdiques August Pi i Sunyer, Universitat de Barcelona, Barcelona, Spain.
Caiming ZhangDigital Media Technology Key Lab of Shandong Province, Jinan, China.
Dinggang ShenDepartment of Radiology and BRIC, University of North Carolina at Chapel Hill, Chapel Hills, North Carolina.
Gang LiDepartment of Radiology and BRIC, University of North Carolina at Chapel Hill, Chapel Hills, North Carolina.

Funding

Continued Development of Infant Brain Analysis ToolsR01MH117943 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, GANG, WANG, LI · 2018 to 2022
$2.3M
Parcellating Infant Cerebral Cortex based on Developmental Patterns of Multimodal MRIR01MH116225 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, GANG · 2018 to 2022
$1.9M
4D Cortical Surface Analysis Tools for Study of Early Brain Development in Typical and High-risk InfantsK01MH107815 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, GANG · 2015 to 2018
$559k
Constructing 4-dimensional Infant Cortical Surface AtlasesR21MH108914 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, GANG · 2016 to 2017
$418k
CERCA Programme from Generalitat de CatalunyaCerebra Foundation for the Brain Injured Child (Carmarthen, Wales, UK)Instituto de Salud Carlos III INT16/00168Instituto de Salud Carlos III PI16/00861"la Caixa" FoundationNational Institutes of Health (NIH) MH107815National Institutes of Health (NIH) MH108914National Institutes of Health (NIH) MH116225National Institutes of Health (NIH) MH117943NIMH NIH HHS K01 MH107815NIMH NIH HHS R01 MH116225NIMH NIH HHS R01 MH117943NIMH NIH HHS R21 MH108914
6 · The paper itself

Abstract

Defining anatomically and functionally meaningful parcellation maps on cortical surface atlases is of great importance in surface-based neuroimaging analysis. The conventional cortical parcellation maps are typically defined based on anatomical cortical folding landmarks in adult surface atlases. However, they are not suitable for fetal brain studies, due to dramatic differences in brain size, shape, and properties between adults and fetuses. To address this issue, we propose a novel data-driven method for parcellation of fetal cortical surface atlases into distinct regions based on the dynamic "growth patterns" of cortical properties (e.g., surface area) from a population of fetuses. Our motivation is that the growth patterns of cortical properties indicate the underlying rapid changes of microstructures, which determine the molecular and functional principles of the cortex. Thus, growth patterns are well suitable for defining distinct cortical regions in development, structure, and function. To comprehensively capture the similarities of cortical growth patterns among vertices, we construct two complementary similarity matrices. One is directly based on the growth trajectories of vertices, and the other is based on the correlation profiles of vertices' growth trajectories in relation to a set of reference points. Then, we nonlinearly fuse these two similarity matrices into a single one, which can better capture both their common and complementary information than by simply averaging them. Finally, based on this fused similarity matrix, we perform spectral clustering to divide the fetal cortical surface atlases into distinct regions. By applying our method on 25 normal fetuses from 26 to 29 gestational weeks, we construct age-specific fetal cortical surface atlases equipped with biologically meaningful parcellation maps based on cortical growth patterns. Importantly, our generated parcellation maps reveal spatially contiguous, hierarchical and bilaterally relatively symmetric patterns of fetal cortical surface development.

Indexed as

Atlases as TopicCerebral CortexFetal DevelopmentFetusGestational AgeHumansImage Processing, Computer-AssistedMagnetic Resonance ImagingNeuroimagingfetal cortical atlasgrowth patternparcellation

Identifiers

PMID31106942
PMCPMC6865595

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.