Evidence map›Paper›PMID 31105718›Full record

ArticleFrontiers in plant science2019

Dissecting the Genetic Basis of Grain Size and Weight in Barley (

Qifei Wang, Genlou Sun, Xifeng Ren, Binbin Du, Yun Cheng, Yixiang Wang, Chengdao Li, Dongfa Sun

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 1 pooled it
10.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 1 synthesis or guideline pooled it, 68 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Genome-wide association studies reveal novel loci for grain size in two-rowed barley (Hordeum vulgare L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  7. Article
  8. Article
  9. Genetic Localization and Homologous Genes Mining for Barley Grain Size.International journal of molecular sciences · 2023
    Review
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  11. Natural variation inFrontiers in plant science · 2023
    Article
  12. Article
  13. Article
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  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Genotyping by Sequencing Advancements in Barley.Frontiers in plant science · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Qifei WangCollege of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China.
Genlou SunDepartment of Biology, Saint Mary's University, Halifax, NS, Canada.
Xifeng RenCollege of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China.
Binbin DuCollege of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China.
Yun ChengCollege of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China.
Yixiang WangCollege of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China.
Chengdao LiSchool of Veterinary and Life Sciences, Murdoch University, Murdoch, WA, Australia.
Dongfa SunCollege of Plant Science and Technology, Huazhong Agricultural University, Wuhan, China.
Huazhong Agricultural University · CNMurdoch University · AUSaint Mary's University · CAYangtze University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Grain size and weight are crucial components of barley yield and quality and are the target characteristics of domestication and modern breeding. Despite this, little is known about the genetic and molecular mechanisms of grain size and weight in barley. Here, we evaluated nine traits determining grain size and weight, including thousand grain weight (Tgw), grain length (Gl), grain width (Gw), grain length-width ratio (Lwr), grain area (Ga), grain perimeter (Gp), grain diameter (Gd), grain roundness (Gr), and factor form density (Ffd), in a double haploid (DH) population for three consecutive years. Using five mapping methods, we successfully identified 60 reliable QTLs and 27 hotspot regions that distributed on all chromosomes except 6H which controls the nine traits of grain size and weight. Moreover, we also identified 164 barley orthologs of 112 grain size/weight genes from rice, maize, wheat and 38 barley genes that affect grain yield. A total of 45 barley genes or orthologs were identified as potential candidate genes for barley grain size and weight, including 12, 20, 9, and 4 genes or orthologs for barley, rice, maize, and wheat, respectively. Importantly, 20 of them were located in the 14 QTL hotspot regions on chromosome 1H, 2H, 3H, 5H, and 7H, which controls barley grain size and weight. These results indicated that grain size/weight genes of other cereal species might have the same or similar functions in barley. Our findings provide new insights into the understanding of the genetic basis of grain size and weight in barley, and new information to facilitate high-yield breeding in barley. The function of these potential candidate genes identified in this study are worth exploring and studying in detail.

Indexed as

barley (Hordeum vulgare L.)comparative genomicsdoubled haploid populationgrain size and weightQTL

Identifiers

PMID31105718
PMCPMC6491919
OpenAlexW2941017110

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.