Evidence map›Paper›PMID 31102032›Full record

ArticleAMB Express2019

Isolation of a 3-hydroxypyridine degrading bacterium, Agrobacterium sp. DW-1, and its proposed degradation pathway.

Shuxue Zhao, Chunhui Hu, Lizhong Guo, Kuiran Li, Hao Yu

Open access · goldAbstract read
In one paragraph

Article in AMB Express, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Shuxue ZhaoShandong Provincial Key Laboratory of Applied Mycology, College of Life Sciences, Qingdao Agricultural University, 700 Changcheng Road, Chengyang District, Qingdao, 266109, Shandong Province, People's Republic of China.
Chunhui HuShandong Provincial Key Laboratory of Applied Mycology, College of Life Sciences, Qingdao Agricultural University, 700 Changcheng Road, Chengyang District, Qingdao, 266109, Shandong Province, People's Republic of China.
Lizhong GuoShandong Provincial Key Laboratory of Applied Mycology, College of Life Sciences, Qingdao Agricultural University, 700 Changcheng Road, Chengyang District, Qingdao, 266109, Shandong Province, People's Republic of China.
Kuiran LiKey Laboratory of Marine Environmental Science and Ecology, Ministry of Education, Ocean University of China, 238 Songling Road, Laoshan District, Qingdao, 266100, Shandong Province, People's Republic of China. likr@ouc.edu.cn.
Hao YuShandong Provincial Key Laboratory of Applied Mycology, College of Life Sciences, Qingdao Agricultural University, 700 Changcheng Road, Chengyang District, Qingdao, 266109, Shandong Province, People's Republic of China. yuhaosunshine@163.com.ORCID http://orcid.org/0000-0002-1892-7993
Qingdao Agricultural University · CNOcean University of China · CN

Funding

China National Funds for Distinguished Young Scientists 31600086Natural Science Foundation of Shandong Province ZR2016CQ06
6 · The paper itself

Abstract

A 3-hydroxypyridine degrading bacterium, designated strain DW-1, was isolated from petroleum contaminated soil in Liao River China. 16S rRNA-based phylogenetic analysis indicates that strain DW-1 belongs to genus Agrobacterium. The optimal cultivation temperature and pH for strain DW-1 with 3-hydroxypyridine were 30 °C and 8.0, respectively. Under optimal conditions, strain DW-1 could completely degrade up to 1500 mg/L of 3-hydroxypyridine in 66 h. The 3-hydroxypyridine degradation pathway of strain DW-1 was suggested by HPLC and LC-MS analysis. The first reaction of 3-hydroxypyridine degradation in strain DW-1 was α-hydroxylation so that the major metabolite 2,5-dihydroxypyridine was produced, and then 2,5-dihydroxypyridine was transformed by a Fe

Indexed as

2,5-Dihydroxypyridine3-HydroxypyridineAgrobacteriumMicrobial degradationPathway

Identifiers

PMID31102032
PMCPMC6525221
OpenAlexW2945078226

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.