Evidence map›Paper›PMID 31101898›Full record

ArticleScientific reports2019

Fish diversity of the largest deltaic formation in the Americas - a description of the fish fauna of the Parnaíba Delta using DNA Barcoding.

Aurycéia J Guimarães-Costa, Fabíola S Machado, Rory R S Oliveira, Vinícius Silva-Costa, Marcelo C Andrade, Tommaso Giarrizzo, Ulrich Saint-Paul, Iracilda Sampaio, Horacio Schneider

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Aurycéia J Guimarães-CostaInstituto de Ciências Biológicas, Universidade Federal do Pará, Rua Augusto Corrêa, 2-224, Belém, 66077-830, PA, Brazil. auryceia@yahoo.com.br.ORCID http://orcid.org/0000-0001-7249-604X
Fabíola S MachadoNúcleo de Ecologia Aquática e Pesca da Amazônia, Universidade Federal do Pará, Av. Perimetral 2561, Terra Firme, Belém, 66040-170, PA, Brazil.
Rory R S OliveiraNúcleo de Ecologia Aquática e Pesca da Amazônia, Universidade Federal do Pará, Av. Perimetral 2561, Terra Firme, Belém, 66040-170, PA, Brazil.
Vinícius Silva-CostaInstituto de Estudos Costeiros, Universidade Federal do Pará, Alameda Leandro Ribeiro, Bragança, 68600000, PA, Brazil.
Marcelo C AndradeNúcleo de Ecologia Aquática e Pesca da Amazônia, Universidade Federal do Pará, Av. Perimetral 2561, Terra Firme, Belém, 66040-170, PA, Brazil.ORCID http://orcid.org/0000-0002-3573-5774
Tommaso GiarrizzoNúcleo de Ecologia Aquática e Pesca da Amazônia, Universidade Federal do Pará, Av. Perimetral 2561, Terra Firme, Belém, 66040-170, PA, Brazil.
Ulrich Saint-PaulZentrum für Marine Tropenforschung (ZMT), Fahrenheitstr. 6, 28359, Bremen, Germany.
Iracilda SampaioInstituto de Ciências Biológicas, Universidade Federal do Pará, Rua Augusto Corrêa, 2-224, Belém, 66077-830, PA, Brazil.
Horacio SchneiderInstituto de Ciências Biológicas, Universidade Federal do Pará, Rua Augusto Corrêa, 2-224, Belém, 66077-830, PA, Brazil.ORCID http://orcid.org/0000-0002-5987-6395

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Deltas are dynamic and productive systems of enormous ecological significance, encompassing unique and biologically diverse wetland habitats. Here, we present the first data on the molecular diversity of the fish fauna of the Parnaíba Delta, the largest deltaic formation of the Americas. Partial sequences (626 bp) of the mitochondrial COI gene (Cytochrome c oxidase subunit I) were used to barcode 402 individuals, representing 128 species, belonging to 98 genera, 57 families, 17 orders and two classes. The most abundant orders were the Perciformes, Siluriformes, Gobiiformes, and Pleuronectiformes. The Neighbor-Joining (NJ), Bayesian Inference (BI), and BIN analyses produced 103 molecular clusters, while the Automatic Barcode Gap Discovery (ABGD) and Maximum Likelihood (ML) approaches revealed 102 clusters. The mean conspecific, congeneric and confamilial genetic distances were 0.33%, 14.37%, and 18.60%, respectively. Intraspecific divergence ranged from 0.0% to 1.4%, and all species presented barcode gaps, with the exception of two clusters of Cathorops spixii (OTU 96 and OTU 103), which were separated by a low interspecific distance (1.2%), which overlaps the maximum intraspecific genetic distance (1.4%). The barcode data provide new insights into the fish diversity of the Parnaíba Delta, which will be important for the development of further research on this fauna.

Indexed as

AnimalsBiodiversityBrazilCatfishesDNA Barcoding, TaxonomicElectron Transport Complex IVFishesFlatfishesGeographyPerciformesRiversWetlandsElectron Transport Complex IV

Identifiers

PMID31101898
PMCPMC6525184

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.