Evidence map›Paper›PMID 31101872›Full record

ArticleScientific reports2019

Refining the Genomic Region Containing a Major Locus Controlling Fruit Maturity in Peach.

H Elsadr, S Sherif, T Banks, D Somers, S Jayasankar

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact, top 100% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

H ElsadrUniversity of Guelph, Department of Plant Agriculture, Ontario, Canada.
S SherifAlson H. Smith Jr. Agricultural Research and Extension Center, Virginia Tech, Winchester, Virginia, USA.
T BanksVineland Research and Innovation Centre, Department of Plant Agriculture, University of Guelph, Guelph, Ontario, Canada.
D SomersVineland Research and Innovation Centre, Department of Plant Agriculture, University of Guelph, Guelph, Ontario, Canada.
S JayasankarUniversity of Guelph, Department of Plant Agriculture, Ontario, Canada. jsubrama@uoguelph.ca.
University of Guelph · CAVineland Research and Innovation Centre · CAVirginia Tech · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Maturity date (MD), defined as the duration between the first calendar day of the year and maturity, and fruit development period (FDP), defined as the duration between full bloom and maturity, are highly variable in peach [Prunus persica (L.) Batsch]. There is a need to discover molecular markers associated with these traits in order to enhance the efficiency and reliability of breeding for extending the harvest season in peach. An association mapping population consisting of 132 peach accessions was phenotypically evaluated for MD and FDP, and genotypically characterized using the genotyping-by-sequencing (GBS) approach. The phenotypic and genotypic data collected were used to conduct a genome-wide association study (GWAS). The GWAS identified three SNPs on chromosome 4 that are significantly associated with both FDP and MD. These three SNPs covered a region of 43,067 bp; we referred to this region as the MD/FDP locus. Seven genes were identified in the MD/FDP locus. One or more of these genes is believed to regulate some aspect of maturity in peach. The data reported here is expected to aid in marker-assisted seedling selection (MASS) targeted towards widening peach germplasm for maturity, particularly early maturity.

Indexed as

Genome, PlantChromosome MappingFruitGenetic Association StudiesGenetic MarkersGenome-Wide Association StudyPlant BreedingPolymorphism, Single NucleotidePrunus persicaSeasonsTime FactorsGenetic Markers

Identifiers

PMID31101872
PMCPMC6525192
OpenAlexW2525197377

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.