Evidence map›Paper›PMID 31101838›Full record

ArticleScientific reports2019

Transcriptome profiles revealed the mechanisms underlying the adaptation of yak to high-altitude environments.

Jin-Wei Xin, Zhi-Xin Chai, Cheng-Fu Zhang, Qiang Zhang, Yong Zhu, Han-Wen Cao, Qiu-Mei Ji, Jin-Cheng Zhong

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 42 citations in OpenAlex.

  1. Isolation, Genomic Evolution, and Pathogenicity ofAnimals : an open access journal from MDPI · 2026
    Article
  2. Article
  3. A comprehensive full-length transcriptome atlas across multiple organs of an Indian yak breed-Arunachali.Mammalian genome : official journal of the International Mammalian Genome Society · 2026
    Article
  4. A Multi-Tissue Yak (Animals : an open access journal from MDPI · 2026
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  9. Review
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  18. Study of Transcriptomic Analysis of Yak (Animals : an open access journal from MDPI · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Jin-Wei XinState Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, P. R. China.
Zhi-Xin ChaiKey Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Sichuan Province and Ministry of Education, Southwest Minzu University, Chengdu, P. R. China.
Cheng-Fu ZhangState Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, P. R. China.
Qiang ZhangState Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, P. R. China.
Yong ZhuState Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, P. R. China.
Han-Wen CaoState Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, P. R. China.
Qiu-Mei JiState Key Laboratory of Hulless Barley and Yak Germplasm Resources and Genetic Improvement, Lhasa, P. R. China. qiumei05@126.com.
Jin-Cheng ZhongKey Laboratory of Qinghai-Tibetan Plateau Animal Genetic Resource Reservation and Utilization, Sichuan Province and Ministry of Education, Southwest Minzu University, Chengdu, P. R. China. zhongjincheng518@126.com.
Tibet Academy of Agricultural and Animal Husbandry Sciences · CNSouthwest Minzu University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The yak is a valuable species in the Qinghai-Tibet Plateau of China. Nevertheless, the molecular mechanisms underlying its adaptation to high-altitude environments remain largely unknown. In the present study, comparative transcriptome sequencing was performed for lung and gluteus tissues from two species of low-altitude cattle (Sanjiang and Holstein cattle), Tibetan cattle (living at a moderate altitude), and yak (living at a high altitude) and the differentially expressed genes were validated using real-time quantitative PCR. The results showed that CD36 antigen was up-regulated and CD59 antigen was down-regulated in yak in comparison to the other animals, which might promote the development of red blood cells and inhibit the development of lymphocytes in yak. In addition, thrombospondin type 1, coagulation factor 5/8, and fibronectin were all down-regulated, but serpin and alpha 2-macroglobulin (A2M) were up-regulated. These differences would inhibit blood coagulation, thus reducing the risk of pulmonary edema. The expression levels of the calcium-release, potassium, and transient receptor potential channels decreased in yak, minimizing membrane depolarization and the harmful effects of pulmonary edema. Eleven KEGG pathways associated with innate immunity were more activated in yak and Tibetan cattle than in other cattle strains, which should reduce their risk of infection and disease. These changes together might facilitate the adaptation of yak and Tibetan cattle to live in high-altitude habitats.

Indexed as

AltitudeAcclimatizationAnimalsBlood CoagulationBlood Coagulation FactorsCattleCD36 AntigensCD59 AntigensChinaErythrocytesErythropoiesisFibronectinsGene Expression ProfilingGene Expression RegulationGenes, RegulatorHigh-Throughput Nucleotide SequencingBlood Coagulation FactorsCD36 AntigensCD59 AntigensFibronectinsPregnancy-Associated alpha 2-MacroglobulinsSerpinsThrombospondin 1

Identifiers

PMID31101838
PMCPMC6525198
OpenAlexW2946574376

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.