Evidence map›Paper›PMID 31101811›Full record

ArticleNature communications2019

Airway response to respiratory syncytial virus has incidental antibacterial effects.

Charles J Sande, James M Njunge, Joyce Mwongeli Ngoi, Martin N Mutunga, Timothy Chege, Elijah T Gicheru, Elizabeth M Gardiner, Agnes Gwela, Christopher A Green, Simon B Drysdale and 3 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 24 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 2 pooled it
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 2 syntheses or guidelines pooled it, 43 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Charles J SandeKEMRI-Wellcome Trust Research Programme, Bofa Rd, Kilifi, - P.O. Box 230 - 80108, Kenya. csande@kemri-wellcome.org.ORCID http://orcid.org/0000-0002-8364-6063
James M NjungeKEMRI-Wellcome Trust Research Programme, Bofa Rd, Kilifi, - P.O. Box 230 - 80108, Kenya.ORCID http://orcid.org/0000-0002-8524-9133
Joyce Mwongeli NgoiKEMRI-Wellcome Trust Research Programme, Bofa Rd, Kilifi, - P.O. Box 230 - 80108, Kenya.
Martin N MutungaKEMRI-Wellcome Trust Research Programme, Bofa Rd, Kilifi, - P.O. Box 230 - 80108, Kenya.
Timothy ChegeKEMRI-Wellcome Trust Research Programme, Bofa Rd, Kilifi, - P.O. Box 230 - 80108, Kenya.
Elijah T GicheruKEMRI-Wellcome Trust Research Programme, Bofa Rd, Kilifi, - P.O. Box 230 - 80108, Kenya.
Elizabeth M GardinerKEMRI-Wellcome Trust Research Programme, Bofa Rd, Kilifi, - P.O. Box 230 - 80108, Kenya.
Agnes GwelaKEMRI-Wellcome Trust Research Programme, Bofa Rd, Kilifi, - P.O. Box 230 - 80108, Kenya.
Christopher A GreenOxford Vaccine Group, University of Oxford, and the NIHR Oxford Biomedical Research Centre, Oxford, Oxford, OX3 7LE, UK.
Simon B DrysdaleOxford Vaccine Group, University of Oxford, and the NIHR Oxford Biomedical Research Centre, Oxford, Oxford, OX3 7LE, UK.
James A BerkleyKEMRI-Wellcome Trust Research Programme, Bofa Rd, Kilifi, - P.O. Box 230 - 80108, Kenya.ORCID http://orcid.org/0000-0002-1236-849X
D James NokesKEMRI-Wellcome Trust Research Programme, Bofa Rd, Kilifi, - P.O. Box 230 - 80108, Kenya.ORCID http://orcid.org/0000-0001-5426-1984
Andrew J PollardOxford Vaccine Group, University of Oxford, and the NIHR Oxford Biomedical Research Centre, Oxford, Oxford, OX3 7LE, UK.
Kenya Medical Research Institute · KEUniversity of Oxford · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

RSV infection is typically associated with secondary bacterial infection. We hypothesise that the local airway immune response to RSV has incidental antibacterial effects. Using coordinated proteomics and metagenomics analysis we simultaneously analysed the microbiota and proteomes of the upper airway and determined direct antibacterial activity in airway secretions of RSV-infected children. Here, we report that the airway abundance of Streptococcus was higher in samples collected at the time of RSV infection compared with samples collected one month later. RSV infection is associated with neutrophil influx into the airway and degranulation and is marked by overexpression of proteins with known antibacterial activity including BPI, EPX, MPO and AZU1. Airway secretions of children infected with RSV, have significantly greater antibacterial activity compared to RSV-negative controls. This RSV-associated, neutrophil-mediated antibacterial response in the airway appears to act as a regulatory mechanism that modulates bacterial growth in the airways of RSV-infected children.

Indexed as

Bacterial InfectionsCell DegranulationChild, PreschoolHumansInfantInfant, NewbornKenyaMetagenomicsMicrobiotaNeutrophilsProteomicsRespiratory MucosaRespiratory Syncytial Virus, HumanRespiratory Syncytial Virus InfectionsStreptococcus

Identifiers

PMID31101811
PMCPMC6525170
OpenAlexW2945078298

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.