Evidence map›Paper›PMID 31098744›Full record

ArticleAnalytical and bioanalytical chemistry2019

Evaluating the structural complexity of isomeric bile acids with ion mobility spectrometry.

Xueyun Zheng, Francesca B Smith, Noor A Aly, Jingwei Cai, Richard D Smith, Andrew D Patterson, Erin S Baker

Open access · greenAbstract read
In one paragraph

Article in Analytical and bioanalytical chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Xueyun ZhengDepartment of Chemistry, Texas A &M University, College Station, TX, 77842, USA.
Francesca B SmithBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.
Noor A AlyDepartment of Toxicology, Texas A &M University, College Station, TX, 77842, USA.
Jingwei CaiDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA, 16802, USA.
Richard D SmithBiological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA.
Andrew D PattersonDepartment of Biochemistry and Molecular Biology, Pennsylvania State University, University Park, PA, 16802, USA.
Erin S BakerDepartment of Chemistry, North Carolina State University, 2620 Yarbrough Dr., Campus Box 8204, Raleigh, NC, 27695, USA. ebaker@ncsu.edu.
Pacific Northwest National Laboratory · USPennsylvania State University · USTexas A&M University · USNorth Carolina State University · US

Funding

Equipment Supplement Request for a Research Resource for Ultra-sensitive High Throughput ProteomicsP41GM103493 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2012 to 2022
$22.6M
Single cell, multi-parametric high throughput platform to classify endocrine disruptor potential of mixturesP42ES027704 · NIEHS · TEXAS A&M UNIVERSITY · PI Thomas Joseph McDonald · 2017 to 2026
$21.2M
Regulatory Science in Environmental Health and ToxicologyT32ES026568 · NIEHS · TEXAS A&M UNIVERSITY · PI Weihsueh A Chiu, Natalie M Johnson · 2016 to 2026
$3.8M
Platform Providing Increased Throughput, Sensitivity and Specificity for MetaboloR01ES022190 · NIEHS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI BAKER, ERIN S · 2012 to 2016
$2.2M
Optimized Metabolite Extraction, Separation, and Identification for MetabolomicsR01ES022186 · NIEHS · PENNSYLVANIA STATE UNIVERSITY, THE · PI PATTERSON, ANDREW · 2012 to 2016
$2.0M
Environmental Ah Receptor Ligand Impact on the Host-Microbiome Metabolic AxisR01ES028288 · NIEHS · PENNSYLVANIA STATE UNIVERSITY, THE · PI PATTERSON, ANDREW · 2017 to 2021
$1.7M
NIEHS NIH HHS P42 ES027704NIEHS NIH HHS R01 ES022186NIEHS NIH HHS R01 ES022190NIEHS NIH HHS R01 ES028288NIEHS NIH HHS T32 ES026568NIGMS NIH HHS P41 GM103493
6 · The paper itself

Abstract

Bile acids (BAs) play an integral role in digestion through the absorption of nutrients, emulsification of fats and fat-soluble vitamins, and maintenance of cholesterol levels. Metabolic disruption, diabetes, colorectal cancer, and numerous other diseases have been linked with BA disruption, making improved BA analyses essential. To date, most BA measurements are performed using liquid chromatography separations in conjunction with mass spectrometry measurements (LC-MS). However, 10-40 min LC gradients are often used for BA analyses and these may not even be sufficient for distinguishing all the important isomers present in the human body. Ion mobility spectrometry (IMS) is a promising tool for BA evaluations due to its ability to quickly separate isomeric molecules with subtle structural differences. In this study, we utilized drift tube IMS (DTIMS) coupled with MS to characterize 56 different unlabeled BA standards and 16 deuterated versions. In the DTIMS-MS analyses of 12 isomer groups, BAs with smaller m/z values were easily separated in either their deprotonated or sodiated forms (or both). However, as the BAs grew in m/z value, they became more difficult to separate with two isomer groups being inseparable. Metal ions such as copper and zinc were then added to the overlapping BAs, and due to different binding sites, the resulting complexes were separable. Thus, the rapid structural measurements possible with DTIMS-MS show great potential for BAs measurements with and without prior LC separations.

Indexed as

Bile Acids and SaltsCopperHumansIon Mobility SpectrometryIsomerismMolecular StructureReference StandardsZincBile Acids and SaltsCopperZincBile acidsCollisional cross sectionsIon mobility spectrometry

Identifiers

PMID31098744
PMCPMC6612315
OpenAlexW2945624740

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.