Evidence map›Paper›PMID 31098397›Full record

ArticlemSystems

Age- and Sex-Dependent Patterns of Gut Microbial Diversity in Human Adults.

Jacobo de la Cuesta-Zuluaga, Scott T Kelley, Yingfeng Chen, Juan S Escobar, Noel T Mueller, Ruth E Ley, Daniel McDonald, Shi Huang, Austin D Swafford, Rob Knight and 1 more

Abstract read
In one paragraph

Article in mSystems. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 255 papers, 8 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
255citing papers in PubMed, 8 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

255 citing papers in PubMed, 8 syntheses or guidelines pooled it.

  1. Pooled it
  2. Global Microbiome: Core and Unique Signatures Across Diverse Populations.International journal of molecular sciences · 2026
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195 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jacobo de la Cuesta-Zuluaga *Department of Microbiome Science, Max Planck Institute for Developmental Biology, Tübingen, Germany.ORCID https://orcid.org/0000-0002-7369-992X
Scott T Kelley *Department of Biology, San Diego State University, San Diego, California, USA.ORCID https://orcid.org/0000-0001-9547-4169
Yingfeng ChenDepartment of Biology, San Diego State University, San Diego, California, USA.
Juan S EscobarVidarium-Nutrition, Health and Wellness Research Center, Grupo Empresarial Nutresa, Medellin, Colombia.ORCID https://orcid.org/0000-0001-7304-917X
Noel T MuellerDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA.
Ruth E LeyDepartment of Microbiome Science, Max Planck Institute for Developmental Biology, Tübingen, Germany.
Daniel McDonaldDepartment of Pediatrics, University of California, San Diego, La Jolla, California, USA.ORCID https://orcid.org/0000-0003-0876-9060
Shi HuangDepartment of Pediatrics, University of California, San Diego, La Jolla, California, USA.
Austin D SwaffordCenter for Microbiome Innovation, University of California, San Diego, La Jolla, California, USA.
Rob KnightDepartment of Pediatrics, University of California, San Diego, La Jolla, California, USA.
Varykina G ThackrayDepartment of Obstetrics, Gynecology and Reproductive Sciences, University of California, San Diego, La Jolla, California, USA.

Funding

Research BaseP30DK072488 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI TAYLOR, SIMEON I. · 2005 to 2019
$17.3M
The Role of FSH in Female InfertilityP50HD012303 · NICHD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHANG, R JEFFREY · 1985 to 2020
$7.5M
The Effects of Diet on the Gut Microbiome and Short Chain Fatty AcidsK01HL141589 · NHLBI · UNIVERSITY OF COLORADO DENVER · PI MUELLER, NOEL T · 2018 to 2022
$845k
NHLBI NIH HHS K01 HL141589NICHD NIH HHS P50 HD012303NIDDK NIH HHS P30 DK072488
6 · The paper itself

Abstract

Gut microbial diversity changes throughout the human life span and is known to be associated with host sex. We investigated the association of age, sex, and gut bacterial alpha diversity in three large cohorts of adults from four geographical regions: subjects from the United States and United Kingdom in the American Gut Project (AGP) citizen-science initiative and two independent cohorts of Colombians and Chinese. In three of the four cohorts, we observed a strong positive association between age and alpha diversity in young adults that plateaued after age 40 years. We also found sex-dependent differences that were more pronounced in younger adults than in middle-aged adults, with women having higher alpha diversity than men. In contrast to the other three cohorts, no association of alpha diversity with age or sex was observed in the Chinese cohort. The association of alpha diversity with age and sex remained after adjusting for cardiometabolic parameters in the Colombian cohort and antibiotic usage in the AGP cohort. We further attempted to predict the microbiota age in individuals using a machine-learning approach for the men and women in each cohort. Consistent with our alpha-diversity-based findings, U.S. and U.K. women had a significantly higher predicted microbiota age than men, with a reduced difference being seen above age 40 years. This difference was not observed in the Colombian cohort and was observed only in middle-aged Chinese adults. Together, our results provide new insights into the influence of age and sex on the biodiversity of the human gut microbiota during adulthood while highlighting similarities and differences across diverse cohorts.

Indexed as

16S rRNA ampliconagediversitymicrobiomesex

Identifiers

PMID31098397
PMCPMC6517691

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.