Evidence map›Paper›PMID 31098005›Full record

ArticleACS medicinal chemistry letters2019

Tetracyclines as Inhibitors of Pre-microRNA Maturation: A Disconnection between RNA Binding and Inhibition.

Amanda L Garner, Daniel A Lorenz, Jorge Sandoval, Erin E Gallagher, Samuel A Kerk, Tanpreet Kaur, Arya Menon

Open access · greenAbstract read
In one paragraph

Article in ACS medicinal chemistry letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.8field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Heterobifunctional small molecules to modulate RNA function.Trends in pharmacological sciences · 2024
    Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Targeting RNA structures with small molecules.Nature reviews. Drug discovery · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Drugging the "undruggable" microRNAs.Cellular and molecular life sciences : CMLS · 2021
    Review
  16. Article
  17. MicroRNAs Responding to Space Radiation.International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Amanda L GarnerDepartment of Medicinal Chemistry, College of Pharmacy, and Program in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.
Daniel A LorenzDepartment of Medicinal Chemistry, College of Pharmacy, and Program in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.
Jorge SandovalDepartment of Medicinal Chemistry, College of Pharmacy, and Program in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.
Erin E GallagherDepartment of Medicinal Chemistry, College of Pharmacy, and Program in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.
Samuel A KerkDepartment of Medicinal Chemistry, College of Pharmacy, and Program in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.
Tanpreet KaurDepartment of Medicinal Chemistry, College of Pharmacy, and Program in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.
Arya MenonDepartment of Medicinal Chemistry, College of Pharmacy, and Program in Chemical Biology, University of Michigan, Ann Arbor, Michigan 48109, United States.
University of Michigan · US

Funding

Research Training in BiogerontologyT32AG000114 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SCOTT PLETCHER · 1985 to 2026
$12.4M
Discovery of Selective Small Molecule Probes for pre-microRNAsR01GM118329 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GARNER, AMANDA · 2016 to 2018
$930k
NIA NIH HHS T32 AG000114NIGMS NIH HHS R01 GM118329
6 · The paper itself

Abstract

In a high-throughput screening campaign, we recently discovered the rRNA-binding tetracyclines, methacycline and meclocycline, as inhibitors of Dicer-mediated processing of microRNAs. Herein, we describe our biophysical and biochemical characterization of these compounds. Interestingly, although direct, albeit weak, binding to the pre-microRNA hairpins was observed, the inhibitory activity of these compounds was not due to RNA binding. Through additional biochemical and chemical studies, we revealed that metal chelation likely plays a principle role in their mechanism of inhibition. By exploring the activity of other known RNA-binding scaffolds, we identified additional disconnections between direct RNA interaction and inhibition of Dicer processing. Thus, the results presented within provide a valuable case study in the complexities of targeting RNA with small molecules, particularly with weak binding and potentially promiscuous scaffolds.

Identifiers

PMID31098005
PMCPMC6512005
OpenAlexW2941571667

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.