Evidence map›Paper›PMID 31097731›Full record

ArticleScientific reports2019

Lack of selective resistance of influenza A virus in presence of host-targeted antiviral, UV-4B.

Kelly L Warfield, Kaitlyn R Schaaf, Lisa Evans DeWald, Kevin B Spurgers, Wei Wang, Eric Stavale, Michelle Mendenhall, Meghan H Shilts, Timothy B Stockwell, Dale L Barnard and 2 more

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Trial
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Transportin-3 Facilitates Uncoating of Influenza A Virus.International journal of molecular sciences · 2022
    Article
  11. Effect of SerialJournal of veterinary research · 2022
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Human Organs-on-Chips for Virology.Trends in microbiology · 2020
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kelly L WarfieldEmergent BioSolutions, Gaithersburg, MD, 20879, USA. warfieldk@ebsi.com.
Kaitlyn R SchaafDepartment of Infectious Diseases, Vanderbilt University Medical Center, Nashville, TN, 37232, USA.
Lisa Evans DeWaldEmergent BioSolutions, Gaithersburg, MD, 20879, USA.
Kevin B SpurgersEmergent BioSolutions, Gaithersburg, MD, 20879, USA.
Wei WangInfectious Diseases Group, J. Craig Venter Institute, Rockville, MD, 20852, USA.
Eric StavaleIntegrated Biotherapeutics Inc., Gaithersburg, MD, 20878, USA.
Michelle MendenhallInstitute for Antiviral Research, Utah State University, Logan, UT, 84322-5600, USA.
Meghan H ShiltsDepartment of Infectious Diseases, Vanderbilt University Medical Center, Nashville, TN, 37232, USA.
Timothy B StockwellInfectious Diseases Group, J. Craig Venter Institute, Rockville, MD, 20852, USA.ORCID http://orcid.org/0000-0002-3595-4539
Dale L BarnardInstitute for Antiviral Research, Utah State University, Logan, UT, 84322-5600, USA.ORCID http://orcid.org/0000-0002-4505-020X
Urban RamstedtUnither Virology, LLC, Silver Spring, MD, 20910, USA.
Suman R DasDepartment of Infectious Diseases, Vanderbilt University Medical Center, Nashville, TN, 37232, USA. suman.r.das@vanderbilt.edu.

Funding

Viral and Host Determinants of Infant and Childhood Allergy and AsthmaU19AI095227 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Dawn C Newcomb · 2011 to 2026
$34.9M
The J. Craig Venter Institute Genome Center for Infectious DiseasesU19AI110819 · NIAID · J. CRAIG VENTER INSTITUTE, INC. · PI TAN, GENE · 2014 to 2018
$29.7M
Tennessee CFAR: Implementation of Culturally Responsive Trauma-Informed Care with Youth with HIV in Memphis, TNP30AI110527 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI John Koethe · 2015 to 2026
$27.5M
NIAID NIH HHS HHSN272201100030CNIAID NIH HHS P30 AI110527NIAID NIH HHS U19 AI095227NIAID NIH HHS U19 AI110819
6 · The paper itself

Abstract

Development of antiviral drug resistance is a continuous concern for viruses with high mutation rates such as influenza. The use of antiviral drugs targeting host proteins required for viral replication is less likely to result in the selection of resistant viruses than treating with direct-acting antivirals. The iminosugar UV-4B is a host-targeted glucomimetic that inhibits endoplasmic reticulum α-glucosidase I and II enzymes resulting in improper glycosylation and misfolding of viral glycoproteins. UV-4B has broad-spectrum antiviral activity against diverse viruses including dengue and influenza. To examine the ability of influenza virus to develop resistance against UV-4B, mouse-adapted influenza virus was passaged in mice in the presence or absence of UV-4B and virus isolated from lungs was used to infect the next cohort of mice, for five successive passages. Deep sequencing was performed to identify changes in the viral genome during passaging in the presence or absence of UV-4B. Relatively few minor variants were identified within each virus and the ratio of nonsynonymous to synonymous (dN/dS) substitutions of minor variants confirmed no apparent positive selection following sustained exposure to UV-4B. Three substitutions (one synonymous in PB2, one nonsynonymous in M and PA each) were specifically enriched (>3%) in UV-4B-treated groups at passage five. Recombinant viruses containing each individual or combinations of these nonsynonymous mutations remained sensitive to UV-4B treatment in mice. Overall, these data provide evidence that there is a high genetic barrier to the generation and selection of escape mutants following exposure to host-targeted iminosugar antivirals.

Indexed as

AnimalsAntiviral AgentsDrug Resistance, ViralFemaleGenome, ViralGlycoside Hydrolase InhibitorsInfluenza A virusMiceMice, Inbred BALB CMutationOrthomyxoviridae InfectionsRecombination, GeneticSelection, GeneticAntiviral AgentsGlycoside Hydrolase Inhibitors

Identifiers

PMID31097731
PMCPMC6522537

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.