Evidence map›Paper›PMID 31097480›Full record

ArticleG3 (Bethesda, Md.)2019

Global Shifts in Gene Expression Profiles Accompanied with Environmental Changes in Cnidarian-Dinoflagellate Endosymbiosis.

Yuu Ishii, Shinichiro Maruyama, Hiroki Takahashi, Yusuke Aihara, Takeshi Yamaguchi, Katsushi Yamaguchi, Shuji Shigenobu, Masakado Kawata, Naoto Ueno, Jun Minagawa

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
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  5. Article
  6. Insights into coral bleaching under heat stress from analysis of gene expression in a sea anemone model system.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  7. Reduced thermal tolerance in a coral carrying CRISPR-induced mutations in the gene for a heat-shock transcription factor.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  8. Inner Workings: A microscopic mystery at the heart of mass-coral bleaching.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Yuu IshiiGraduate School of Life Sciences, Tohoku University, Sendai, Miyagi, Japan.
Shinichiro MaruyamaGraduate School of Life Sciences, Tohoku University, Sendai, Miyagi, Japan maruyama@tohoku.ac.jp kawata@tohoku.ac.jp.ORCID 0000-0002-1128-5916
Hiroki TakahashiDivision of Morphogenesis, National Institute for Basic Biology, Okazaki, Aichi, Japan.
Yusuke AiharaDivision of Environmental Photobiology, National Institute for Basic Biology, Okazaki, Aichi, Japan.
Takeshi YamaguchiDivision of Morphogenesis, National Institute for Basic Biology, Okazaki, Aichi, Japan.
Katsushi YamaguchiFunctional Genomics Facility, National Institute for Basic Biology, Okazaki, Aichi, Japan.
Shuji ShigenobuFunctional Genomics Facility, National Institute for Basic Biology, Okazaki, Aichi, Japan.
Masakado KawataGraduate School of Life Sciences, Tohoku University, Sendai, Miyagi, Japan maruyama@tohoku.ac.jp kawata@tohoku.ac.jp.
Naoto UenoDivision of Morphogenesis, National Institute for Basic Biology, Okazaki, Aichi, Japan.
Jun MinagawaDepartment of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi, Japan.ORCID 0000-0002-3028-3203
National Institute for Basic Biology · JPTohoku University · JPThe Graduate University for Advanced Studies, SOKENDAI · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stable endosymbiotic relationships between cnidarian animals and dinoflagellate algae are vital for sustaining coral reef ecosystems. Recent studies have shown that elevated seawater temperatures can cause the collapse of their endosymbiosis, known as 'bleaching', and result in mass mortality. However, the molecular interplay between temperature responses and symbiotic states still remains unclear. To identify candidate genes relevant to the symbiotic stability, we performed transcriptomic analyses under multiple conditions using the symbiotic and apo-symbiotic (symbiont free)

Indexed as

EnvironmentGene Expression ProfilingSymbiosisTranscriptomeAnimalsCnidariaDinoflagellidaGene Expression RegulationCnidariansLysosomeRNAseqSymbiodiniaceaeSymbiosis

Identifiers

PMID31097480
PMCPMC6643889
OpenAlexW2945159840

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.