Evidence map›Paper›PMID 31096993›Full record

ArticleRetrovirology2019

Bovine leukemia virus proviral load is more strongly associated with bovine major histocompatibility complex class II DRB3 polymorphism than with DQA1 polymorphism in Holstein cow in Japan.

Shin-Nosuke Takeshima, Ayumu Ohno, Yoko Aida

Open access · goldAbstract read
In one paragraph

Article in Retrovirology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 86 citations in OpenAlex.

  1. Article
  2. Review
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  7. First Identification ofPathogens (Basel, Switzerland) · 2025
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  8. Polymorphism ofPathogens (Basel, Switzerland) · 2025
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  15. Pathogens (Basel, Switzerland) · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Shin-Nosuke TakeshimaViral Infectious Diseases Unit, RIKEN, Wako, Saitama, 351-0198, Japan.
Ayumu OhnoViral Infectious Diseases Unit, RIKEN, Wako, Saitama, 351-0198, Japan.
Yoko AidaViral Infectious Diseases Unit, RIKEN, Wako, Saitama, 351-0198, Japan. aida@riken.jp.
RIKEN · JPJumonji University · JP

Funding

Bio-oriented Technology Research Advancement Institution 16817983Japan Society for the Promotion of Science 16H02590Japan Society for the Promotion of Science (JP) 16K08039Special Scheme Project on Vitalizing Management Entities of Agriculture, Forestry and Fisheries 16930548
6 · The paper itself

Abstract

Bovine leukemia virus (BLV) causes enzootic bovine leukosis and is closely related to the human T-lymphotropic virus. Bovine major histocompatibility complex (BoLAs) are used extensively as markers of disease and immunological traits in cattle. For BLV diagnosis, proviral load is a major diagnosis index for the determination of disease progression and transmission risk. Therefore, we investigated the frequency of BoLA-DRB3 alleles, BoLA-DQA1 alleles, and haplotypes of BoLA class II isolated from the heads of 910 BLV-infected cows out of 1290 cows assessed from BLV-positive farms, in a nationwide survey from 2011 to 2014 in Japan. Our aim was to identify BoLA class II polymorphisms associated with the BLV proviral load in the Holstein cow. The study examined 569 cows with a high proviral load and 341 cows with a low proviral load. Using the highest odds ratio (OR) as a comparison index, we confirmed that BoLA-DRB3 was the best marker for determining which cow spread the BLV (OR 13.9 for BoLA-DRB3, OR 11.5 for BoLA-DQA1, and OR 6.2 for BoLA class II haplotype). In addition, DRB3*002:01, *009:02, *012:01, *014:01, and *015:01 were determined as BLV provirus associated alleles. BoLA-DRB3*002:01, *009:02, and *014:01 were determined as resistant alleles (OR > 1), and BoLA-DRB3*012:01 and *015:01 were determined as susceptible alleles (OR < 1). In this study, we showed that BoLA-DRB3 was a good marker for determining which cow spread BLV, and we found not only one resistant allele (BoLA-DRB3*009:02), but also two other disease-resistant alleles and two disease-susceptible alleles. This designation of major alleles as markers of susceptibility or resistance can allow the determination of the susceptibility or resistance of most cows to disease. Overall, the results of this study may be useful in eliminating BLV from farms without having to separate cows into several cowsheds.

Indexed as

Leukemia Virus, BovinePolymorphism, GeneticProvirusesViral LoadAllelesAnimalsCattleDisease ResistanceFemaleGenetic Predisposition to DiseaseHaplotypesHistocompatibility Antigens Class IIJapanPhenotypeBoLA-DRB3 antigenHistocompatibility Antigens Class IIBoLA-DQA1BoLA-DRB3Bovine leukemia virusJapanese HolsteinProviral load

Identifiers

PMID31096993
PMCPMC6524304
OpenAlexW2947674774

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.