Evidence map›Paper›PMID 31096902›Full record

ArticleBMC microbiology2019

Trichoderma lixii (IIIM-B4), an endophyte of Bacopa monnieri L. producing peptaibols.

Meenu Katoch, Deepika Singh, Kamal K Kapoor, R A Vishwakarma

Abstract read
In one paragraph

Article in BMC microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Article
  3. Exploring the Bioactive Secondary Metabolites of Two ArgentineJournal of fungi (Basel, Switzerland) · 2025
    Article
  4. Article
  5. Article
  6. EndophyticFrontiers in microbiology · 2023
    Article
  7. Peptaibol Production and Characterization fromJournal of fungi (Basel, Switzerland) · 2022
    Article
  8. Article
  9. Review
  10. Rare Glutamic Acid Methyl Ester Peptaibols fromInternational journal of molecular sciences · 2021
    Article
  11. Peptaibol-Containing Extracts ofMolecules (Basel, Switzerland) · 2021
    Article
  12. The Emericellipsins A-E from an Alkalophilic FungusJournal of fungi (Basel, Switzerland) · 2021
    Article
  13. Article
  14. Genome Sequence ofMicroorganisms · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Meenu KatochMicrobial Biotechnology Division, Indian Institute of Integrative Medicine, Canal Road, Jammu, 180001, India. meenusamiksha@rediffmail.com.ORCID 0000-0002-1694-5856
Deepika SinghQuality Control and Quality Assurance Division, Indian Institute of Integrative Medicine, Canal Road, Jammu, 180001, India. dsingh@iiim.ac.in.
Kamal K KapoorDepartment of Chemistry, University of Jammu, Jammu, 180001, India.
R A VishwakarmaMedicinal Chemistry Division, Indian Institute of Integrative Medicine, Jammu, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundExploration of microbes isolated from north western Himalayas for bioactive natural products.

resultsA strain of Trichoderma lixii (IIIM-B4) was isolated from Bacopa monnieri L. The ITS based rDNA gene sequence of strain IIIM-B4 displayed 99% sequence similarity with different Trichoderma harzianum species complex. The highest score was displayed for Hypocrea lixii strain FJ462763 followed by H. nigricans strain NBRC31285, Trichoderma lixii strain CBS 110080, T. afroharzianum strain CBS124620 and Trichoderma guizhouense BPI:GJS 08135 respectively. Position of T. lixii (IIIM-B4) in phylogenetic tree suggested separate identity of the strain. Microbial dynamics of T. lixii (IIIM-B4) was investigated for small peptides. Medium to long chain length peptaibols of 11 residue (Group A), 14 residue (Group B) and 17 residue (Group C) were identified using Matrix Assisted Laser Desorption/Ionization-Time of Flight (MALDI-TOF) mass spectrometer. Optimization is undeniably a desideratum for maximized production of desirable metabolites from microbial strain. Here optimization studies were carried out on T. lixii (IIIM-B4) using different growth media through Intact Cell Mass Spectrometry (ICMS). A multifold increase was obtained in production of 11 residue peptaibols using rose bengal medium. Out of these, one of them named as Tribacopin AV was isolated and sequenced through mass studied. It was found novel as having unique sequence Ac-Gly-Leu-Leu-Leu-Ala-Leu-Pro-Leu-Aib-Val-Gln-OH. It was found to have antifungal activity against Candida albicans (25 μg/mL MIC).

conclusionIn this study, we isolated a strain of T. lixii (IIIM-B4) producing medium and long chain peptaibols. One of them named as Tribacopin AV was found novel as having unique sequence Ac-Gly-Leu-Leu-Leu-Ala-Leu-Pro-Leu-Aib-Val-Gln-OH, which had antifungal properties.

Indexed as

Antifungal AgentsBacopaBiological ProductsCandida albicansChromatography, High Pressure LiquidEndophytesMass SpectrometryPeptaibolsPhylogenySequence Analysis, ProteinTrichodermaAntifungal AgentsBiological ProductsPeptaibolsBacopa monnieriIntact cell mass spectrometryMatrix assisted laser desorption/ionisation-time of flight (MALDI-TOF) mass spectrometerOptimizationPeptaibols

Identifiers

PMID31096902
PMCPMC6524271

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.