Evidence map›Paper›PMID 31095702›Full record

ReviewInflammatory bowel diseases2019

Challenges in IBD Research: Environmental Triggers.

Shuk-Mei Ho, James D Lewis, Emeran A Mayer, Scott E Plevy, Emil Chuang, Stephen M Rappaport, Kenneth Croitoru, Joshua R Korzenik, Jeffrey Krischer, Jeffrey S Hyams and 9 more

Erratum issuedOpen access · bronzeAbstract readReview
In one paragraph

Review in Inflammatory bowel diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 92 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 16 institutions in 2 countries.

Shuk-Mei HoUniversity of Cincinnati, Cincinnati, Ohio.
James D LewisPerelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
Emeran A MayerUniversity of California Los Angeles, Los Angeles, California.
Scott E PlevySynlogic, Cambridge Massachusetts, Massachusetts.
Emil ChuangProgenity, San Diego, California.
Stephen M RappaportUniversity of California Berkeley, Berkeley, California.
Kenneth CroitoruMount Sinai Hospital, University of Toronto, Toronto, Canada.
Joshua R KorzenikBrigham and Women's Hospital, Boston, Massachusetts.
Jeffrey KrischerUniversity of South Florida, Tampa, Florida.
Jeffrey S HyamsConnecticut Children's Medical Center, Hartford, Connecticut.
Richard JudsonUnited States Environmental Protection Agency, Washington, District of Columbia.
Manolis KellisMassachusetts Institute of Technology, Cambridge, Massachusetts.
Michael JerrettPerelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
Gary W MillerColumbia University, New York, New York.
Melanie L GrantChildren's National Health System, Washington, District of Columbia.
Nataly ShtraizentCrohn's & Colitis Foundation, New York, New York.
Gerard HonigCrohn's & Colitis Foundation, New York, New York.
Andrés Hurtado-LorenzoCrohn's & Colitis Foundation, New York, New York.
Gary D WuPerelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
Crohn's and Colitis Foundation · USUniversity of Pennsylvania · USBrigham and Women's Hospital · USChildren's National · USColumbia University · USConnecticut Children's Medical Center · USEnvironmental Protection Agency · USMassachusetts Institute of Technology · USMount Sinai Hospital · CAProgenity (United States) · USSynlogic (United States) · USUniversity of California, Berkeley · USUniversity of California, Los Angeles · USUniversity of Cincinnati · USUniversity of Manitoba · CAUniversity of South Florida · US

Funding

PERCEPTION AND MODULATION OF VISCERAL SENSATIONSR01DK048351 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI MAYER, EMERAN A · 1996 to 2019
$8.2M
NIDDK NIH HHS R01 DK048351
6 · The paper itself

Abstract

Environmental triggers is part of five focus areas of the Challenges in IBD research document, which also includes preclinical human IBD mechanisms, novel technologies, precision medicine and pragmatic clinical research. The Challenges in IBD research document provides a comprehensive overview of current gaps in inflammatory bowel diseases (IBD) research and delivers actionable approaches to address them. It is the result of a multidisciplinary input from scientists, clinicians, patients, and funders, and represents a valuable resource for patient centric research prioritization. In particular, the environmental triggers section is focused on the main research gaps in elucidating causality of environmental factors in IBD. Research gaps were identified in: 1) epidemiology of exposures; 2) identification of signatures of biological response to exposures; and 3) mechanisms of how environmental exposures drive IBD. To address these gaps, the implementation of longitudinal prospective studies to determine disease evolution and identify sub-clinical changes in response to exposures is proposed. This can help define critical windows of vulnerability and risk prediction. In addition, systems biology analysis and in silico modeling were proposed as approaches to integrate the IBD exposome for the identification of biological signatures of response to exposures, and to develop prediction models of the effects of environmental factors in driving disease activity and response to therapy. This research could lead to identification of biomarkers of exposures and new modalities for therapeutic intervention. Finally, hypothesis-driven mechanistic studies to understand gene-environment interactions and to validate causality of priority factors should be performed to determine how environment influences clinical outcomes.

Indexed as

DietEnvironmental ExposureGastrointestinal MicrobiomeGene-Environment InteractionHumansInflammatory Bowel DiseasesLife StyleRisk FactorsantibioticCrohn’s diseasedietenvironmentepidemiologyexposomein silico modelingpollutantsmokingulcerative colitisvirus

Identifiers

PMID31095702
PMCPMC6787673
OpenAlexW2946678947

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.