Evidence map›Paper›PMID 31095388›Full record

ArticleThe journal of physical chemistry. B2019

Assessing Possible Mechanisms of Micrometer-Scale Electron Transfer in Heme-Free Geobacter sulfurreducens Pili.

Xuyan Ru, Peng Zhang, David N Beratan

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry. B, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 45 citations in OpenAlex.

  1. Sources of non-Arrhenius electron transport in bacterial nanowires.Physical chemistry chemical physics : PCCP · 2026
    Article
  2. Single-Molecule Electron Transport in Peptoids.The journal of physical chemistry. B · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Secondary structure determines electron transport in peptides.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. New Perspective on Electron Transfer through Molecules.The journal of physical chemistry letters · 2022
    Article
  9. Assessing Thermal Response of Redox Conduction forThe journal of physical chemistry. B · 2022
    Article
  10. Article
  11. Article
  12. Oxalate decarboxylase uses electron hole hopping for catalysis.The Journal of biological chemistry · 2021
    Article
  13. Role of intramolecular hydrogen bonds in promoting electron flow through amino acid and oligopeptide conjugates.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  14. Article
  15. Review
  16. Multifaceted aspects of charge transfer.Physical chemistry chemical physics : PCCP · 2020
    Article
  17. Article
  18. Frontiers in microbiology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Xuyan RuDepartment of Chemistry , Duke University , Durham , North Carolina 27708 , United States.ORCID 0000-0001-8395-0666
Peng ZhangDepartment of Chemistry , Duke University , Durham , North Carolina 27708 , United States.
David N BeratanDepartment of Chemistry , Duke University , Durham , North Carolina 27708 , United States.ORCID 0000-0003-4758-8676
Duke University · US

Funding

MAPPING OF ELECTRON TUNNELING PATHWAYS IN PROTEINSR01GM048043 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DAVID BERATAN · 1993 to 2026
$6.0M
NIGMS NIH HHS R01 GM048043
6 · The paper itself

Abstract

The electrically conductive pili of Geobacter sulfurreducens are of both fundamental and practical interest. They facilitate extracellular and interspecies electron transfer (ET) and also provide an electrical interface between living and nonliving systems. We examine the possible mechanisms of G. sulfurreducens electron transfer in regimes ranging from incoherent to coherent transport. For plausible ET parameters, electron transfer in G. sulfurreducens bacterial nanowires mediated only by the protein is predicted to be dominated by incoherent hopping between phenylalanine (Phe) and tyrosine (Tyr) residues that are 3 to 4 Å apart, where Phe residues in the hopping pathways may create delocalized "islands." This mechanism could be accessible in the presence of strong oxidants that are capable of oxidizing Phe and Tyr residues. We also examine the physical requirements needed to sustain biological respiration via nanowires. We find that the hopping regimes with ET rates on the order of 10

Indexed as

Electric ConductivityElectron TransportFimbriae ProteinsGeobacterModels, MolecularThermodynamicsFimbriae Proteins

Identifiers

PMID31095388
PMCPMC6613197
OpenAlexW2946206275

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.