Evidence map›Paper›PMID 31092839›Full record

ArticleScientific reports2019

Expression of Ice-Binding Proteins in Caenorhabditis elegans Improves the Survival Rate upon Cold Shock and during Freezing.

Masahiro Kuramochi, Chiaki Takanashi, Akari Yamauchi, Motomichi Doi, Kazuhiro Mio, Sakae Tsuda, Yuji C Sasaki

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Dynamic motions of ice-binding proteins in livingBiochemistry and biophysics reports · 2022
    Article
  7. Regulated strategies of cold-adapted microorganisms in response to cold: a review.Environmental science and pollution research international · 2021
    Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Masahiro KuramochiGraduate School of Frontier Sciences, The University of Tokyo, Kashiwa, 277-8561, Japan. masahiro-kuramochi@edu.k.u-tokyo.ac.jp.ORCID http://orcid.org/0000-0003-1643-3997
Chiaki TakanashiGraduate School of Frontier Sciences, The University of Tokyo, Kashiwa, 277-8561, Japan.
Akari YamauchiGraduate School of Life Science, Hokkaido University, Sapporo, 060-0810, Japan.
Motomichi DoiMolecular Neurobiology Research Group and DAI-LAB, Biomedical Research Institute, National Institute of Advance Industrial Science and Technology (AIST), Tsukuba, 305-8566, Japan.
Kazuhiro MioAIST-UTokyo Advanced Operando-Measurement Technology Open Innovation Laboratory (OPERANDO-OIL), National Institute of Advanced Industrial Science and Technology (AIST), Kashiwa, 277-8565, Japan.
Sakae TsudaAIST-UTokyo Advanced Operando-Measurement Technology Open Innovation Laboratory (OPERANDO-OIL), National Institute of Advanced Industrial Science and Technology (AIST), Kashiwa, 277-8565, Japan. s.tsuda@aist.go.jp.ORCID http://orcid.org/0000-0002-1399-0619
Yuji C SasakiGraduate School of Frontier Sciences, The University of Tokyo, Kashiwa, 277-8561, Japan. ycsasaki@edu.k.u-tokyo.ac.jp.ORCID http://orcid.org/0000-0003-3403-237X
National Institute of Advanced Industrial Science and Technology · JPHokkaido University · JP

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
NIH HHS P40 OD010440
6 · The paper itself

Abstract

Ice-binding proteins (IBPs) are capable of binding ice crystals and inhibiting their growth at freezing temperatures. IBPs are also thought to stabilize the cell membrane at non-freezing temperatures near 0 °C. These two effects have been assumed to reduce cold- and freezing-induced damage to cells and tissues. However, knowledge regarding the effects of IBP on the living animals is limited. Here, we characterized the relationship between the IBP effects and the physiological role by using the nematode Caenorhabditis elegans. The expression of fish (NfeIBPs)- and fungus-derived IBPs (AnpIBPs and TisIBP8) in C. elegans improved its survival rate during exposure to 0 and -2 °C (cold shock) and -5 °C (freezing). The observed cold tolerance of C. elegans after cold shock is attributable to the stabilization of cell-membrane lipids with IBPs, and the freezing tolerance at -5 °C can be attributed to the inhibition of ice-crystal growth by the IBPs. Significantly, the survival rate of C. elegans at -5 °C was improved by expression of wild-type AnpIBP and maximized by that of TisIBP8, whereas it was lowered when a defective AnpIBP mutant was expressed. These results suggest that the ice-binding ability of IBP has a good correlation with the survival rate of C. elegans during freezing.

Indexed as

Cold-Shock ResponseAcclimatizationAnimalsAntifreeze ProteinsCaenorhabditis elegansFish ProteinsFreezingFungal ProteinsIceRecombinant ProteinsAntifreeze ProteinsFish ProteinsFungal ProteinsIceRecombinant Proteins

Identifiers

PMID31092839
PMCPMC6520345
OpenAlexW2945589467

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.