Evidence map›Paper›PMID 31092821›Full record

ArticleNature communications2019

Dynamic assembly of ribbon synapses and circuit maintenance in a vertebrate sensory system.

Haruhisa Okawa, Wan-Qing Yu, Ulf Matti, Karin Schwarz, Benjamin Odermatt, Haining Zhong, Yoshihiko Tsukamoto, Leon Lagnado, Fred Rieke, Frank Schmitz and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 36 citations in OpenAlex.

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  12. Role of Ribeye PXDLS/T-binding cleft in normal synaptic ribbon function.bioRxiv : the preprint server for biology · 2023
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  20. Transmission at rod and cone ribbon synapses in the retina.Pflugers Archiv : European journal of physiology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 4 countries.

Haruhisa OkawaDepartment of Biological Structure, University of Washington, Seattle, 98195, WA, USA.
Wan-Qing YuDepartment of Biological Structure, University of Washington, Seattle, 98195, WA, USA.ORCID http://orcid.org/0000-0002-9275-391X
Ulf MattiDepartment of Neuroanatomy, Medical School Homburg/Saar, Institute for Anatomy and Cell Biology, Saarland University, Homburg/Saar, 66421, Germany.ORCID http://orcid.org/0000-0001-5548-1081
Karin SchwarzDepartment of Neuroanatomy, Medical School Homburg/Saar, Institute for Anatomy and Cell Biology, Saarland University, Homburg/Saar, 66421, Germany.
Benjamin OdermattInstitute of Anatomy, University of Bonn, Bonn, 53115, Germany.ORCID http://orcid.org/0000-0002-9361-2772
Haining ZhongVollum institute, Oregon Health and Science University, Portland, 97239, OR, USA.ORCID http://orcid.org/0000-0002-7109-4724
Yoshihiko TsukamotoDepartment of Biology, Hyogo College of Medicine, Nishinomiya, 663-8501, Hyogo, Japan.
Leon LagnadoSchool of Life Sciences, University of Sussex, Brighton, BN1 9QG, UK.ORCID http://orcid.org/0000-0002-1098-8839
Fred RiekeDepartment of Physiology and Biophysics, University of Washington, Seattle, 98195, WA, USA.
Frank SchmitzDepartment of Neuroanatomy, Medical School Homburg/Saar, Institute for Anatomy and Cell Biology, Saarland University, Homburg/Saar, 66421, Germany.
Rachel O L WongDepartment of Biological Structure, University of Washington, Seattle, 98195, WA, USA. wongr2@uw.edu.
University of Washington · USSaarland University · DEHyogo Medical University · JPOregon Health & Science University · USUniversity of Bonn · DEUniversity of Sussex · GB

Funding

Vision Research CoreP30EY001730 · NEI · UNIVERSITY OF WASHINGTON · PI JAMES Bryant HURLEY · 1985 to 2026
$23.5M
Circuit Assembly in the Vertebrate Retina-SupplementR01EY017101 · NEI · UNIVERSITY OF WASHINGTON · PI WONG, RACHEL O · 2006 to 2020
$4.7M
Retinal interactions between rod and cone signalsR01EY028111 · NEI · UNIVERSITY OF WASHINGTON · PI RIEKE, FREDERICK M · 2017 to 2021
$1.9M
Deutsche Forschungsgemeinschaft (German Research Foundation) SFB894,TPA7, Schm797/8-1NEI NIH HHS P30 EY001730NEI NIH HHS R01 EY017101NEI NIH HHS R01 EY028111U.S. Department of Health & Human Services | NIH | National Eye Institute (NEI) EY01730U.S. Department of Health & Human Services | NIH | National Eye Institute (NEI) EY17101
6 · The paper itself

Abstract

Ribbon synapses transmit information in sensory systems, but their development is not well understood. To test the hypothesis that ribbon assembly stabilizes nascent synapses, we performed simultaneous time-lapse imaging of fluorescently-tagged ribbons in retinal cone bipolar cells (BCs) and postsynaptic densities (PSD95-FP) of retinal ganglion cells (RGCs). Ribbons and PSD95-FP clusters were more stable when these components colocalized at synapses. However, synapse density on ON-alpha RGCs was unchanged in mice lacking ribbons (ribeye knockout). Wildtype BCs make both ribbon-containing and ribbon-free synapses with these GCs even at maturity. Ribbon assembly and cone BC-RGC synapse maintenance are thus regulated independently. Despite the absence of synaptic ribbons, RGCs continued to respond robustly to light stimuli, although quantitative examination of the responses revealed reduced frequency and contrast sensitivity.

Indexed as

AnimalsCells, CulturedDisks Large Homolog 4 ProteinIntravital MicroscopyLightLuminescent ProteinsMiceMice, TransgenicMicroscopy, FluorescencePhotic StimulationPrimary Cell CultureRed Fluorescent ProteinRetinal Bipolar CellsRetinal Cone Photoreceptor CellsRetinal Ganglion CellsSynapsesDisks Large Homolog 4 ProteinDlg4 protein, mouseLuminescent ProteinsRed Fluorescent Protein

Identifiers

PMID31092821
PMCPMC6520400
OpenAlexW2943462934

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.