Evidence map›Paper›PMID 31092606›Full record

ArticleG3 (Bethesda, Md.)2019

A Non-Dicer RNase III and Four Other Novel Factors Required for RNAi-Mediated Transposon Suppression in the Human Pathogenic Yeast

Jordan E Burke, Adam D Longhurst, Prashanthi Natarajan, Beiduo Rao, John Liu, Jade Sales-Lee, Yasaman Mortensen, James J Moresco, Jolene K Diedrich, John R Yates and 1 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. RiboCop surveils pre-rRNA processing by Dicer in cellular quiescence.bioRxiv : the preprint server for biology · 2025
    Article
  4. Distinct evolutionary trajectories following loss of RNA interference inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Distinct evolutionary trajectories following loss of RNA interference inbioRxiv : the preprint server for biology · 2024
    Article
  6. Challenges and Opportunities Arising from Host-International journal of molecular sciences · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Comparative genomics ofbioRxiv : the preprint server for biology · 2024
    Article
  11. Gene Silencing via RNA Interference in Cryptococcus.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  12. Long Non-Coding RNAs inFrontiers in cellular and infection microbiology · 2022
    Article
  13. Article
  14. Article
  15. The Evolutionary Significance of RNAi in the Fungal Kingdom.International journal of molecular sciences · 2020
    Review
  16. Review
  17. Article
  18. Review
  19. Epigenetic mechanisms of drug resistance in fungi.Fungal genetics and biology : FG & B · 2019
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Jordan E BurkeDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA 94158.
Adam D LonghurstDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA 94158.
Prashanthi NatarajanDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA 94158.
Beiduo RaoDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA 94158.
John LiuDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA 94158.
Jade Sales-LeeDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA 94158.
Yasaman MortensenDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA 94158.
James J MorescoSalk Institute for Biological Studies, La Jolla, CA 92037.
Jolene K DiedrichSalk Institute for Biological Studies, La Jolla, CA 92037.
John R YatesDepartment of Molecular Medicine, the Scripps Research Institute, La Jolla, CA.
Hiten D MadhaniDepartment of Biochemistry and Biophysics, University of California, San Francisco, CA 94158, Chan-Zuckerberg Biohub, San Francisco, CA 94158 hitenmadhani@gmail.com.ORCID 0000-0001-7400-6657
University of California, San Francisco · USSalk Institute for Biological Studies · USChan Zuckerberg Initiative (United States) · USScripps Research Institute · US

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI MACCOSS, MICHAEL · 2012 to 2021
$20.7M
GENETICS OF EUCARYOTIC AND PROCARYOTIC ORGANISMST32GM007810 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ASHRAFI, KAVEH, NARLIKAR, GEETA J · 1985 to 2020
$15.1M
Mechanisms of Gene SilencingR01GM071801 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Hiten D Madhani · 2005 to 2026
$7.1M
Robust Identification and accurate quantification of RNA transcripts on a system wide scaleR01GM120507 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LI, JINGYI JESSICA · 2016 to 2021
$1.7M
NIGMS NIH HHS P41 GM103533NIGMS NIH HHS R01 GM071801NIGMS NIH HHS R01 GM120507
6 · The paper itself

Abstract

The human pathogenic yeast

Indexed as

DNA Transposable ElementsRNA InterferenceBacterial ProteinsCryptococcosisCryptococcus neoformansGene DosageGene Expression Regulation, BacterialHumansMutagenesis, InsertionalMutationRibonuclease IIIRNA, Small InterferingBacterial ProteinsDNA Transposable ElementsRibonuclease IIIRNA, Small InterferingRNAiRNA surveillancetransposon

Identifiers

PMID31092606
PMCPMC6643885
OpenAlexW2951923184

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.