Evidence map›Paper›PMID 31091281›Full record

ArticlePloS one2019

HLA alleles, especially amino-acid signatures of HLA-DPB1, might contribute to the molecular pathogenesis of early-onset autoimmune thyroid disease.

Dong-Hwan Shin, In-Cheol Baek, Hyung Jae Kim, Eun-Jeong Choi, Moonbae Ahn, Min Ho Jung, Byung-Kyu Suh, Won Kyoung Cho, Tai-Gyu Kim

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 2 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 2 syntheses or guidelines pooled it, 45 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Dong-Hwan ShinDepartment of Microbiology, College of Medicine, The Catholic University of Korea, Seoul, Korea.
In-Cheol BaekHematopoietic Stem Cell Bank, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Hyung Jae KimHematopoietic Stem Cell Bank, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Eun-Jeong ChoiHematopoietic Stem Cell Bank, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Moonbae AhnDepartment of Pediatrics, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Min Ho JungDepartment of Pediatrics, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Byung-Kyu SuhDepartment of Pediatrics, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Won Kyoung ChoDepartment of Pediatrics, College of Medicine, The Catholic University of Korea, Seoul, Korea.
Tai-Gyu KimDepartment of Microbiology, College of Medicine, The Catholic University of Korea, Seoul, Korea.ORCID 0000-0002-2226-2138
Catholic University of Korea · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The major histocompatibility complex region has been suggested to play an important role in the development of autoimmune thyroid disease (AITD). In this study, we investigated the associations of human leukocyte antigen (HLA) alleles and amino acid variants of HLA with early-onset AITD. HLA class I and class II genes were analyzed in 116 Korean children with AITDs (Graves' disease [GD]: 71, Hashimoto's disease [HD]: 45) and 142 healthy controls. HLA-B*46:01 (OR = 3.96, Pc = 0.008), -C*01:02 (OR = 2.51 Pc = 0.04), -DPB1*02:02 (OR = 3.99, Pc = 0.04), and -DPB1*05:01 (OR = 4.6, Pc = 0.003) were significantly associated with GD, and HLA-A*02:07 (OR = 4.68, Pc = 0.045) and -DPB1*02:02 (OR = 6.57, Pc = 0.0001) with HD. The frequency of HLA-DPB1*05:01 was significantly higher in GD patients than in HD patients (Pc = 0.0005). Furthermore, differences were found between patients with Thyroid associated ophthalmopathy (TAO) and those without TAO in the distribution of HLA-B*54:01 (8.6% vs. 30.6%, P = 0.04) and -C*03:03 (37.1% vs. 11.1%, P = 0.02). In the analysis of amino acid variants of HLA molecules, both Leu35 (OR = 23.38, P = 0.0002) and Glu55 (OR = 23.38, P = 0.0002) of HLA-DPB1 were strongly associated with GD and showed different distributions between GD and HD (P = 0.001). Our results suggest that HLA alleles, especially amino-acid signatures of the HLA-DP β chain, might contribute to the molecular pathogenesis of early-onset AITD.

Indexed as

AllelesGenetic Predisposition to DiseasePolymorphism, GeneticAdolescentAdultAge of OnsetCase-Control StudiesChildChild, PreschoolFemaleGene ExpressionGene FrequencyGraves DiseaseHaplotypesHashimoto DiseaseHLA-DP beta-ChainsHLA-DPB1 antigenHLA-DP beta-Chains

Identifiers

PMID31091281
PMCPMC6519818
OpenAlexW2946570840

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.