Evidence map›Paper›PMID 31091244›Full record

ArticlePloS one2019

Single nucleotide polymorphisms within MUC4 are associated with colorectal cancer survival.

Shun Lu, Calogerina Catalano, Stefanie Huhn, Barbara Pardini, Linda Partu, Veronika Vymetalkova, Ludmila Vodickova, Miroslav Levy, Thomas Buchler, Kari Hemminki and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

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  11. Prognostic Value of SLC4A4 and its Correlation with Immune Infiltration in Colon Adenocarcinoma.Medical science monitor : international medical journal of experimental and clinical research · 2020
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 5 countries.

Shun LuDivision of Molecular Genetic Epidemiology, German Cancer Research Center, Heidelberg, Germany.ORCID 0000-0002-1833-475X
Calogerina CatalanoDivision of Molecular Genetic Epidemiology, German Cancer Research Center, Heidelberg, Germany.
Stefanie HuhnDivision of Molecular Genetic Epidemiology, German Cancer Research Center, Heidelberg, Germany.
Barbara PardiniItalian Institute for Genomic Medicine (IIGM), Turin, Italy.
Linda PartuDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, Prague, Czech Republic.
Veronika VymetalkovaDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, Prague, Czech Republic.
Ludmila VodickovaDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, Prague, Czech Republic.
Miroslav LevyDepartment of Oncology, Thomayer Hospital, Prague, Czech Republic.
Thomas BuchlerDepartment of Oncology, Thomayer Hospital, Prague, Czech Republic.
Kari HemminkiDivision of Molecular Genetic Epidemiology, German Cancer Research Center, Heidelberg, Germany.
Pavel VodickaDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, Prague, Czech Republic.
Asta FörstiDivision of Molecular Genetic Epidemiology, German Cancer Research Center, Heidelberg, Germany.
Czech Academy of Sciences · CZGerman Cancer Research Center · DEThomayer University Hospital · CZItalian institute for Genomic Medicine · ITUniversity of Electronic Science and Technology of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mucins and their glycosylation have been suggested to play an important role in colorectal carcinogenesis. We examined potentially functional genetic variants in the mucin genes or genes involved in their glycosylation with respect to colorectal cancer (CRC) risk and clinical outcome. We genotyped 23 single nucleotide polymorphisms (SNPs) covering 123 SNPs through pairwise linkage disequilibrium (r2>0.80) in the MUC1, MUC2, MUC4, MUC5AC, MUC6, and B3GNT6 genes in a hospital-based case-control study of 1532 CRC cases and 1108 healthy controls from the Czech Republic. We also analyzed these SNPs in relation to overall survival and event-free survival in a subgroup of 672 patients. Among patients without distant metastasis at the time of diagnosis, two MUC4 SNPs, rs3107764 and rs842225, showed association with overall survival (HR 1.40, 95%CI 1.08-1.82, additive model, log-rank p = 0.004 and HR 0.64, 95%CI 0.42-0.99, recessive model, log-rank p = 0.01, respectively) and event-free survival (HR 1.31, 95%CI 1.03-1.68, log-rank p = 0.004 and HR 0.64, 95%CI 0.42-0.96, log-rank p = 0.006, respectively) after adjustment for age, sex and TNM stage. Our data suggest that genetic variation especially in the transmembrane mucin gene MUC4 may play a role in the survival of CRC and further studies are warranted.

Indexed as

AdultAgedAged, 80 and overBiomarkers, TumorCase-Control StudiesColonic NeoplasmsColorectal NeoplasmsCzech RepublicDisease-Free SurvivalFemaleGenotypeGlycosylationHumansKaplan-Meier EstimateLinkage DisequilibriumMaleBiomarkers, TumorMUC4 protein, humanMucin-4Mucins

Identifiers

PMID31091244
PMCPMC6519901
OpenAlexW2945504903

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.