Evidence map›Paper›PMID 31090986›Full record

ArticleChembiochem : a European journal of chemical biology2019

Generation of a Stand-Alone Tryptophan Synthase α-Subunit by Mimicking an Evolutionary Blueprint.

Michael Schupfner, Florian Busch, Vicki H Wysocki, Reinhard Sterner

Open access · greenAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Quaternary Structure of the Tryptophan Synthase α-Subunit Homolog BX1 fromJournal of the American Society for Mass Spectrometry · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Michael SchupfnerInstitute of Biophysics and Physical Biochemistry, University of Regensburg, Universitätsstraße 31, 93053, Regensburg, Germany.
Florian BuschDepartment of Chemistry and Biochemistry and, Resource for Native Mass Spectrometry Guided Structural Biology, The Ohio State University, 473 W 12th Ave, Columbus, OH, 43210, USA.
Vicki H WysockiDepartment of Chemistry and Biochemistry and, Resource for Native Mass Spectrometry Guided Structural Biology, The Ohio State University, 473 W 12th Ave, Columbus, OH, 43210, USA.
Reinhard SternerInstitute of Biophysics and Physical Biochemistry, University of Regensburg, Universitätsstraße 31, 93053, Regensburg, Germany.ORCID 0000-0001-8177-8460
The Ohio State University · USUniversity of Regensburg · DE

Funding

Waters Select Series Cyclic IMS for P41 Native MS Resource Application to Alzheimer's DiseaseP41GM128577 · NIGMS · OHIO STATE UNIVERSITY · PI SOMOGYI, ARPAD · 2018 to 2022
$7.6M
Deutsche Forschungsgemeinschaft STE 891/11-1National Institutes for Health NIH P41GM128577NIGMS NIH HHS P41 GM128577
6 · The paper itself

Abstract

The αββα tryptophan synthase (TS), which is part of primary metabolism, is a paradigm for allosteric communication in multienzyme complexes. In particular, the intrinsically low catalytic activity of the α-subunit TrpA is stimulated several hundredfold through the interaction with the β-subunit TrpB1. The BX1 protein from Zea mays (zmBX1), which is part of secondary metabolism, catalyzes the same reaction as that of its homologue TrpA, but with high activity in the absence of an interaction partner. The intrinsic activity of TrpA can be significantly increased through the exchange of several active-site loop residues, which mimic the corresponding loop in zmBX1. The subsequent identification of activating amino acids in the generated "stand-alone" TrpA contributes to an understanding of allostery in TS. Moreover, findings suggest an evolutionary trajectory that describes the transition from a primary metabolic enzyme regulated by an interaction partner to a self-reliant, stand-alone, secondary metabolic enzyme.

Indexed as

Amino Acid SequenceBiocatalysisBiological EvolutionCatalytic DomainKineticsModels, MolecularMultienzyme ComplexesPlant ProteinsProtein SubunitsSequence Homology, Amino AcidTryptophan SynthaseZea maysMultienzyme ComplexesPlant ProteinsProtein SubunitsTryptophan Synthaseenzymesmolecular evolutionprimary metabolismprotein designsecondary metabolism

Identifiers

PMID31090986
PMCPMC7293203
OpenAlexW2945952349

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.