Evidence map›Paper›PMID 31090204›Full record

ArticleCancer medicine2019

Genetic variants in p53 signaling pathway genes predict chemotherapy efficacy in colorectal cancer.

Ke Zhang, Yixuan Meng, Xiangming Cao, Ye Xu, Mulong Du, Yuan Wu, Lingxiang Liu

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Genetic variants in RNA mCancer medicine · 2023
    Article
  3. The p53 Pathway Related Genes Predict the Prognosis of Colon Cancer.International journal of general medicine · 2022
    Article
  4. Genetic variants in autophagy-related geneFrontiers in oncology · 2022
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Ke ZhangDepartment of Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People's Republic of China.
Yixuan MengThe Key Laboratory of Modern Toxicology of Ministry of Education, Department of Genetic Toxicology, School of Public Health, Nanjing Medical University, Nanjing, People's Republic of China.
Xiangming CaoDepartment of Oncology, The Affiliated Jiangyin Hospital of Southeast University Medical College, Wuxi, China.
Ye XuDepartment of Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People's Republic of China.
Mulong DuThe Key Laboratory of Modern Toxicology of Ministry of Education, Department of Genetic Toxicology, School of Public Health, Nanjing Medical University, Nanjing, People's Republic of China.
Yuan WuDepartment of Medical Oncology, Jiangsu Cancer Hospital, Jiangsu Institute of Cancer Research, The Affiliated Cancer Hospital of Nanjing Medical University, Nanjing, China.
Lingxiang LiuDepartment of Oncology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, People's Republic of China.ORCID 0000-0001-8689-1788
Jiangsu Province Hospital · CNNanjing Medical University · CNJiangsu Cancer Hospital · CNJiangyin People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe murine double minute-2 gene (MDM2) was originally identified as predicting chemotherapy efficacy. However, little is known regarding the association between single nucleotide polymorphisms (SNPs) in the p53 signaling pathway and prognosis/chemotherapy sensitivity in colorectal cancer.

methodsWe analyzed the association between 111 SNPs in 22 p53 signaling pathway genes and both progression-free survival (PFS) and disease control rate (DCR) using Cox regression and logistics regression analysis. The false discovery rate method was used for correction of multiple testing. Secondary structure was predicted by RNAfold. Expression qualitative trait locus analysis and mRNA expression differences were assessed using the GTEx and TCGA databases.

resultsWe found that the rs747828 C allele of TP73 was significantly associated with reduced PFS (HR = 1.64, 95% CI = 1.27-2.12, P = 2.00 × 10

conclusionOur findings indicate that functional genetic variants of TP73 mediate the response to chemotherapy in colorectal cancer.

Indexed as

Genetic VariationSignal TransductionAdultAgedAllelesAnimalsAntineoplastic Combined Chemotherapy ProtocolsColorectal NeoplasmsFemaleGene Expression ProfilingHumansMaleMiceMiddle AgedPolymorphism, Single NucleotidePrognosisTumor Suppressor Protein p53chemotherapycolorectal cancergenetic variantssurvival

Identifiers

PMID31090204
PMCPMC6601596
OpenAlexW2944951862

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.