Evidence map›Paper›PMID 31088929›Full record

ArticlemBio2019

Comparative Loss-of-Function Screens Reveal ABCE1 as an Essential Cellular Host Factor for Efficient Translation of

Danielle E Anderson, Kristin Pfeffermann, So Young Kim, Bevan Sawatsky, James Pearson, Mikhail Kovtun, David L Corcoran, Yvonne Krebs, Kristmundur Sigmundsson, Sharon F Jamison and 7 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in mBio, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 31 citations in OpenAlex.

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  12. Rebirth of the translational machinery: The importance of recycling ribosomes.BioEssays : news and reviews in molecular, cellular and developmental biology · 2022
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  16. Orthogonal genome-wide screens of bat cells identify MTHFD1 as a target of broad antiviral therapy.Proceedings of the National Academy of Sciences of the United States of America · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 4 countries.

Danielle E Anderson *Programme in Emerging Infectious Diseases, Duke-NUS Medical School, Singapore, Singapore.
Kristin Pfeffermann *Veterinary Medicine Division, Paul-Ehrlich-Institute, Langen, Germany.
So Young KimDepartment of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, USA.
Bevan SawatskyVeterinary Medicine Division, Paul-Ehrlich-Institute, Langen, Germany.ORCID 0000-0001-6908-1556
James PearsonDepartment of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, USA.
Mikhail KovtunDepartment of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, USA.
David L CorcoranDepartment of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, USA.
Yvonne KrebsVeterinary Medicine Division, Paul-Ehrlich-Institute, Langen, Germany.
Kristmundur SigmundssonProgramme in Cardiovascular and Metabolic Disorders, Duke-NUS Medical School, Singapore, Singapore.
Sharon F JamisonDepartment of Molecular Genetics and Microbiology, Duke University, Durham, North Carolina, USA.
Zhen Zhen Joanna YeoProgramme in Emerging Infectious Diseases, Duke-NUS Medical School, Singapore, Singapore.
Linda J RennickNational Emerging Infectious Diseases Laboratories, Boston University, Boston, Massachusetts, USA.
Lin-Fa WangProgramme in Emerging Infectious Diseases, Duke-NUS Medical School, Singapore, Singapore.ORCID 0000-0003-2752-0535
Pierre J TalbotINRS-Institut Armand-Frappier, University of Quebec, Laval, Canada.
W Paul DuprexNational Emerging Infectious Diseases Laboratories, Boston University, Boston, Massachusetts, USA.
Mariano A Garcia-BlancoProgramme in Emerging Infectious Diseases, Duke-NUS Medical School, Singapore, Singapore maragarc@utmb.edu veronika.vonmessling@bmbf.bund.de.ORCID 0000-0001-8538-1997
Veronika von MesslingProgramme in Emerging Infectious Diseases, Duke-NUS Medical School, Singapore, Singapore maragarc@utmb.edu veronika.vonmessling@bmbf.bund.de.ORCID 0000-0002-3972-8723
Duke University · USDuke-NUS Medical School · SGPaul Ehrlich Institut · DEBoston University · USInstitut National de la Recherche Scientifique · CA

Funding

Targeting dengue in the mosquito with small moleculesR01AI101431 · NIAID · JOHNS HOPKINS UNIVERSITY · PI DIMOPOULOS, GEORGE, ENGEL, DANIEL A · 2012 to 2016
$4.3M
Discovery and development of broad spectrum anti-flaviviral drugsR01AI089526 · NIAID · DUKE UNIVERSITY · PI ENGEL, DANIEL A, GARCIA-BLANCO, MARIANO A. · 2010 to 2014
$4.1M
Shifting a Paradigm in Vaccine Safety: From Empirical to Rational AttenuationR01AI099100 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI DUPREX, WILLIAM PAUL · 2013 to 2017
$2.0M
CIHR MOP-66989NIAID NIH HHS R01 AI089526NIAID NIH HHS R01 AI099100NIAID NIH HHS R01 AI101431
6 · The paper itself

Abstract

Paramyxoviruses and pneumoviruses have similar life cycles and share the respiratory tract as a point of entry. In comparative genome-scale siRNA screens with wild-type-derived measles, mumps, and respiratory syncytial viruses in A549 cells, a human lung adenocarcinoma cell line, we identified vesicular transport, RNA processing pathways, and translation as the top pathways required by all three viruses. As the top hit in the translation pathway, ABCE1, a member of the ATP-binding cassette transporters, was chosen for further study. We found that ABCE1 supports replication of all three viruses, confirming its importance for viruses of both families. More detailed characterization revealed that ABCE1 is specifically required for efficient viral but not general cellular protein synthesis, indicating that paramyxoviral and pneumoviral mRNAs exploit specific translation mechanisms. In addition to providing a novel overview of cellular proteins and pathways that impact these important pathogens, this study highlights the role of ABCE1 as a host factor required for efficient paramyxovirus and pneumovirus translation.

Indexed as

A549 CellsATP-Binding Cassette TransportersComputational BiologyGene ExpressionHost Microbial InteractionsHumansParamyxoviridaePneumovirusRNA-Binding ProteinsRNA, MessengerRNA, Small InterferingABCE1 protein, humanATP-Binding Cassette TransportersRNA-Binding ProteinsRNA, MessengerRNA, Small InterferingABCE1host factorParamyxoviridaePneumoviridaerespiratory syncytial virusRNAi screen

Identifiers

PMID31088929
PMCPMC6520455
OpenAlexW2945366030

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.