Evidence map›Paper›PMID 31088375›Full record

ArticleBMC infectious diseases2019

Multiplexed kit based on Luminex technology and achievements in synthetic biology discriminates Zika, chikungunya, and dengue viruses in mosquitoes.

Lyudmyla G Glushakova, Barry W Alto, Myong-Sang Kim, Daniel Hutter, Andrea Bradley, Kevin M Bradley, Nathan D Burkett-Cadena, Steven A Benner

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
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  5. Article
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  8. Article
  9. Point-of-Care Devices to Detect Zika and Other Emerging Viruses.Annual review of biomedical engineering · 2020
    Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Lyudmyla G GlushakovaFirebird Biomolecular Sciences LLC, 13709 Progress Blvd, Box 17, Alachua, FL, 32615, USA.
Barry W AltoFlorida Medical Entomology Laboratory, University of Florida, 200 9th Street SE, Vero Beach, FL, 32962, USA.
Myong-Sang KimFirebird Biomolecular Sciences LLC, 13709 Progress Blvd, Box 17, Alachua, FL, 32615, USA.
Daniel HutterFirebird Biomolecular Sciences LLC, 13709 Progress Blvd, Box 17, Alachua, FL, 32615, USA.
Andrea BradleyFirebird Biomolecular Sciences LLC, 13709 Progress Blvd, Box 17, Alachua, FL, 32615, USA.
Kevin M BradleyFirebird Biomolecular Sciences LLC, 13709 Progress Blvd, Box 17, Alachua, FL, 32615, USA.
Nathan D Burkett-CadenaFlorida Medical Entomology Laboratory, University of Florida, 200 9th Street SE, Vero Beach, FL, 32962, USA.
Steven A BennerFirebird Biomolecular Sciences LLC, 13709 Progress Blvd, Box 17, Alachua, FL, 32615, USA. manuscripts@firebirdbio.com.
Firebird Biomolecular Sciences (United States) · USFlorida Medical Entomology Laboratory · USUniversity of Florida · US

Funding

Meeting Urgent Needs in Surveillance and Diagnostics. ZikaR21AI128188 · NIAID · FIREBIRD BIOMOLECULAR SCIENCES, LLC · PI ALTO, BARRY WILMER, BENNER, STEVEN A · 2017 to 2018
$310k
Florida Department of Agriculture and Consumer Services 024376Florida Department of Health 7ZK15National Institute of Allergy and Infectious Diseases R21AI128188NIAID NIH HHS R21 AI128188
6 · The paper itself

Abstract

backgroundThe global expansion of dengue (DENV), chikungunya (CHIKV), and Zika viruses (ZIKV) is having a serious impact on public health. Because these arboviruses are transmitted by the same mosquito species and co-circulate in the same area, a sensitive diagnostic assay that detects them together, with discrimination, is needed.

methodsWe present here a diagnostics panel based on reverse transcription-PCR amplification of viral RNA and an xMap Luminex architecture involving direct hybridization of PCRamplicons and virus-specific probes. Two DNA innovations ("artificially expanded genetic information systems", AEGIS, and "self-avoiding molecular recognition systems", SAMRS) increase the hybridization sensitivity on Luminex microspheres and PCR specificity of the multiplex assay compared to the standard approach (standard nucleotides).

resultsThe diagnostics panel detects, if they are present, these viruses with a resolution of 20 genome equivalents (DENV1), or 10 (DENV3-4, CHIKV) and 80 (DENV2, ZIKV) genome equivalents per assay. It identifies ZIKV, CHIKV and DENV RNAs in a single infected mosquito, in mosquito pools comprised of 5 to 50 individuals, and mosquito saliva (ZIKV, CHIKV, and DENV2). Infected mosquitoes and saliva were also collected on a cationic surface (Q-paper), which binds mosquito and viral nucleic acids electrostatically. All samples from infected mosquitoes displayed only target-specific signals; signals from non-infected samples were at background levels.

conclusionsOur results provide an efficient and multiplex tool that may be used for surveillance of emerging mosquito-borne pathogens which aids targeted mosquito control in areas at high risk for transmission.

Indexed as

AnimalsChikungunya FeverChikungunya virusCulicidaeDengueDengue VirusHumansNucleic Acid HybridizationReagent Kits, DiagnosticReverse Transcriptase Polymerase Chain ReactionRNA, ViralSalivaZika VirusZika Virus InfectionReagent Kits, DiagnosticRNA, ViralCationic paperChikungunyaDengue virusesLuminex DHAReverse-transcription PCRZika

Identifiers

PMID31088375
PMCPMC6518713
OpenAlexW2945353944

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.