Evidence map›Paper›PMID 31088355›Full record

ArticleBMC genomics2019

A high-density genetic map and QTL mapping of leaf traits and glucosinolates in Barbarea vulgaris.

Tong-Jin Liu, You-Jun Zhang, Niels Agerbirk, Hai-Ping Wang, Xiao-Chun Wei, Jiang-Ping Song, Hong-Ju He, Xue-Zhi Zhao, Xiao-Hui Zhang, Xi-Xiang Li

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Tong-Jin LiuInstitute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China.
You-Jun ZhangInstitute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China.
Niels AgerbirkCopenhagen Plant Science Center and Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, 1871, Frederiksberg C, Denmark.
Hai-Ping WangInstitute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China.
Xiao-Chun WeiHenan Academy of Agricultural Sciences, Institute of Horticulture, Zhengzhou, 450002, China.
Jiang-Ping SongInstitute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China.
Hong-Ju HeVegetable Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.
Xue-Zhi ZhaoVegetable Research Center, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097, China.
Xiao-Hui ZhangInstitute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China. zhangxiaohui01@caas.cn.
Xi-Xiang LiInstitute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences; Key Laboratory of Biology and Genetic Improvement of Horticultural Crops, Ministry of Agriculture, Beijing, 100081, China. lixixiang@caas.cn.
Institute of Vegetables and Flowers · CNBeijing Academy of Agricultural and Forestry Sciences · CNChinese Academy of Agricultural Sciences · CNHenan Academy of Agricultural Sciences · CNUniversity of Copenhagen · DK

Funding

Agriculture Research System of the Ministry of Agriculture and Rural Affairs of China CARS-24-A-01Henan Provincial Science and Technology Open Cooperation Project of the Department of Science and Technology of Henan Province 182106000052National Key Technology R & D Program of the Ministry of Science and Technology of China 2013BAD01B04-2
6 · The paper itself

Abstract

backgroundBarbarea vulgaris is a wild cruciferous plant and include two distinct types: the G- and P-types named after their glabrous and pubescent leaves, respectively. The types differ significantly in resistance to a range of insects and diseases as well as glucosinolates and other chemical defenses. A high-density linkage map was needed for further progress to be made in the molecular research of this plant.

resultsWe performed restriction site-associated DNA sequencing (RAD-Seq) on an F

conclusionsThis high-density linkage map and the QTL obtained in this study will be useful for further understanding of the genetic of the B. vulgaris and molecular basis of these traits, many of which are shared in the related crop watercress.

Indexed as

Quantitative Trait LociBarbareaChromosome MappingDNA, PlantGenetic LinkagePhenotypePlant LeavesPolymorphism, Single NucleotideSequence Analysis, DNADNA, PlantBarbarea vulgarisGenetic linkage mapGlucosinolatesLeaf traitsQTLRestriction site-associated DNA sequencing (RAD-Seq)

Identifiers

PMID31088355
PMCPMC6518621
OpenAlexW2947515773

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.