ArticleBMC genomics2019
Genome-wide identification, characterization and expression analysis of the non-specific lipid transfer proteins in potato.
Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed, 35 citations in OpenAlex.
- PfnsLTPd-5 interacts with PfGELP24 to enhance drought and salt stress tolerance in Paulownia fortunei.BMC plant biology · 2026Article
- Peptide hormones in plants.Molecular horticulture · 2025Review
- Potato Non-Specific Lipid Transfer Protein StnsLTPI.33 Is Associated with the Production of Reactive Oxygen Species, Plant Growth, and Susceptibility toPlants (Basel, Switzerland) · 2023Article
- From Gene to Transcript and Peptide: A Deep Overview on Non-Specific Lipid Transfer Proteins (nsLTPs).Antibiotics (Basel, Switzerland) · 2023Review
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- A comprehensive investigation of lipid-transfer proteins fromFrontiers in genetics · 2023Article
- Genome-Wide Identification of Common BeanGenes · 2022Article
- Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2022Article
- Fine Mapping and Candidate Gene Prediction of Tuber Shape ControllingInternational journal of molecular sciences · 2022Article
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- Genome-Wide Identification of LRR-RLK Family inCurrent issues in molecular biology · 2021Article
- Mitogen-Activated Protein Kinase Expression Profiling Revealed Its Role in Regulating Stress Responses in Potato (Plants (Basel, Switzerland) · 2021Article
- Genome-Wide Identification and Expression Profiling of Germin-Like Proteins Reveal Their Role in Regulating Abiotic Stress Response in Potato.Frontiers in plant science · 2021Article
- Genome-Wide Identification and Expression Profiling of DUF221 Gene Family Provides New Insights Into Abiotic Stress Responses in Potato.Frontiers in plant science · 2021Article
- Non-Specific Lipid Transfer Proteins inPathogens (Basel, Switzerland) · 2019Article
Corrections and comments
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Authors and funding
9 authors at 2 institutions in 1 country.
Funding
Abstract
backgroundPlant non-specific lipid transfer proteins (nsLTPs) are small, basic proteins that are abundant in higher plants. They have been reported to play an important role in various plant physiological processes, such as lipid transfer, signal transduction, and pathogen defense. To date, a comprehensive analysis of the potato nsLTP gene family is still lacking after the completion of potato (Solanum tuberosum L.) genome sequencing. A genome-wide characterization, classification and expression analysis of the StnsLTP gene family was performed in this study.
resultsIn this study, a total of 83 nsLTP genes were identified and categorized into eight types based on Boutrot's method. Multiple characteristics of these genes, including phylogeny, gene structures, conserved motifs, protein domains, chromosome locations, and cis-elements in the promoter sequences, were analyzed. The chromosome distribution and the collinearity analyses suggested that the expansion of the StnsLTP gene family was greatly enhanced by the tandem duplications. Ka/Ks analysis showed that 47 pairs of duplicated genes tended to undergo purifying selection during evolution. Moreover, the expression of StnsLTP genes in various tissues was analyzed by using RNA-seq data and verified by quantitative real-time PCR, revealing that the StnsLTP genes were mainly expressed in younger tissues. These results indicated that StnsLTPs may played significant and functionally varied roles in the development of different tissues.
conclusionIn this study, we comprehensively analyzed nsLTPs in potato, providing valuable information to better understand the functions of StnsLTPs in different tissues and pathways, especially in response to abiotic stress.
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