ArticleMetabolomics : Official journal of the Metabolomic Society2019
Volatile apocarotenoid discovery and quantification in Arabidopsis thaliana: optimized sensitive analysis via HS-SPME-GC/MS.
Article in Metabolomics : Official journal of the Metabolomic Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.
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Who cites it
6 citing papers in PubMed, 20 citations in OpenAlex.
- Time-resolved oxidative signal convergence across the algae-embryophyte divide.Nature communications · 2025Article
- Chemical Diversity of Mediterranean Seagrasses Volatilome.Metabolites · 2024Article
- The Effect of Scale Insects on Growth Parameters of cv. Chardonnay and cv. Sauvignon Blanc Grapevines Grown in a Greenhouse.International journal of molecular sciences · 2023Article
- Exploration on Varying Patterns of Morphological Features and Quality of Armeniacae Semen Amarum in Rancid Process Based on Colorimeter, Electronic Nose, and GC/MS Coupled With Human Panel.Frontiers in pharmacology · 2022Article
- Understanding colour retention in red chilli pepper fruit using a metabolite profiling approach.Food chemistry. Molecular sciences · 2021Article
- Plant apocarotenoids: from retrograde signaling to interspecific communication.The Plant journal : for cell and molecular biology · 2021Review
Corrections and comments
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Authors and funding
4 authors at 1 institution in 1 country.
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Abstract
introductionIn the field of carotenoid metabolism researchers' focus has been directed recently toward the discovery and quantification of carotenoid cleavage products (i.e. apocarotenoids, excluding the well-studied carotenoid-derived hormones abscisic acid and strigolactones), due to their emerging roles as putative signaling molecules. Gas chromatography mass spectrometry (GC/MS) and sample preparation via headspace solid phase micro-extraction (HS-SPME) are widely used analytical techniques for broad untargeted metabolomics studies and until now, no optimized quantitative targeted HS-SPME-GC/MS method has been developed specifically for volatile apocarotenoids (VAs) in planta.
objectivesOptimization and subsequent validation of the HS-SPME technique for extracting and quantifying volatile apocarotenoids in planta.
methodsFactors considered during method optimization were HS-SPME parameters; vial storage conditions; different adsorbent SPME fibre coating chemistries; plant tissue matrix effects; and fresh tissues to be analyzed.
resultsMean linear regression in planta calibration correlation coefficients (R
conclusionsAn optimized HS-SPME-GC/MS method for VA detection and quantification was validated in vitro and in planta: based on biological replicates and stringent QA/QC approaches, thereby providing robust detection and quantification of VAs across a broad range of Arabidopsis tissues, fifteen of which were identified for the first time in Arabidopsis.
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