Evidence map›Paper›PMID 31086581›Full record

ArticleExperimental and therapeutic medicine2019

Expression and clinical value of CD105 in renal cell carcinoma based on data mining in The Cancer Genome Atlas.

Donghui Shi, Jianping Che, Yang Yan, Bo Peng, Xudong Yao, Changcheng Guo

Open access · diamondAbstract read
In one paragraph

Article in Experimental and therapeutic medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

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  8. One Hundred Faces of Geraniol.Molecules (Basel, Switzerland) · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Donghui ShiDepartment of Urology, Shanghai 10th People's Hospital, Tongji University, Shanghai 200072, P.R. China.
Jianping CheDepartment of Urology, Shanghai 10th People's Hospital, Tongji University, Shanghai 200072, P.R. China.
Yang YanDepartment of Urology, Shanghai 10th People's Hospital, Tongji University, Shanghai 200072, P.R. China.
Bo PengDepartment of Urology, Shanghai 10th People's Hospital, Tongji University, Shanghai 200072, P.R. China.
Xudong YaoDepartment of Urology, Shanghai 10th People's Hospital, Tongji University, Shanghai 200072, P.R. China.
Changcheng GuoDepartment of Urology, Shanghai 10th People's Hospital, Tongji University, Shanghai 200072, P.R. China.
Tongji University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The objective of the present study was to assess the expression of CD105 and its association with overall survival in three subtypes of renal cell carcinoma (RCC), namely clear cell (cc)RCC, papillary (p)RCC and chromophobe (ch)RCC. Data regarding the transcriptome and copy number of genes in RCC tumor samples and survival were obtained from The Cancer Genome Atlas. Bioinformatics analysis revealed that CD105 is overexpressed in ccRCC tumor tissue vs. normal renal tissue, and a higher CD105 copy number in ccRCC tissues was significantly associated with longer patient survival. The effect of the mRNA expression of CD105 in all three types of RCC and the copy number in pRCC and chRCC on patient survival was insignificant, but certain trends were observed. In addition, CD105 mRNA expression was associated with the metastasis and tumor stage, as well as pathological stage in ccRCC and pRCC. Pathway enrichment analysis revealed that CD105 may, through translation initiation of associated genes, promote RCC progression. The results of the present study suggest that in RCC tumors, the association of CD105 with different stages is complex. To evaluate the role of CD105 in RCC, its function should be assessed in addition to its expression. The exact influence of CD105 mRNA expression and copy number in RCC tumors on patient survival and the underlying mechanisms require further elucidation.

Indexed as

CD105clinical valuerenal cell carcinomasurvivalThe Cancer Genome Atlas

Identifiers

PMID31086581
PMCPMC6489005
OpenAlexW2936667683

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.