Evidence map›Paper›PMID 31086426›Full record

ArticleJournal of the American Statistical Association2018

Variable Selection for Skewed Model-Based Clustering: Application to the Identification of Novel Sleep Phenotypes.

Meredith L Wallace, Daniel J Buysse, Anne Germain, Martica H Hall, Satish Iyengar

Abstract read
In one paragraph

Article in Journal of the American Statistical Association, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Meredith L WallaceDepartment of Statistics, University of Pittsburgh.
Daniel J BuysseDepartment of Psychiatry, University of Pittsburgh.
Anne GermainDepartment of Psychiatry, University of Pittsburgh.
Martica H HallDepartment of Psychiatry, University of Pittsburgh.
Satish IyengarDepartment of Statistics, University of Pittsburgh.

Funding

UNIVERSITY OF PITTSBURGH CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTE: BPCAUL1RR024153 · NCRR · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI REIS, STEVEN E · 2006 to 2011
$73.9M
REDUCING STRESS /SLEEP DISTURBANCES IN CAREGIVERS OF ADP01AG020677 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BUYSSE, DANIEL J. · 2003 to 2015
$17.5M
Statistical Methods for Developing RDoC-based Multidimensional ProfilesK01MH096944 · NIMH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WALLACE, MEREDITH JOANNE LOTZ · 2013 to 2016
$470k
NCRR NIH HHS UL1 RR024153NIA NIH HHS P01 AG020677NIMH NIH HHS K01 MH096944
6 · The paper itself

Abstract

In sleep research, applying finite mixture models to sleep characteristics captured 8 through multiple data types, including self-reported sleep diary, a wrist monitor capturing movement (actigraphy), and brain waves (polysomnography), may suggest new phenotypes that reflect underlying disease mechanisms. However, a direct mixture model application is challenging because there are many sleep variables from which to choose, and sleep variables are often highly skewed even in homogenous samples. Moreover, previous sleep research findings indicate that some of the most clinically interesting solutions will be those that incorporate all three data types. Thus, we present two novel skewed variable selection algorithms based on the multivariate skew normal (MSN) distribution: one that selects the best set of variables ignoring data type and another that embraces the exploratory nature of clustering and suggests multiple statistically plausible sets of variables that each incorporate all data types. Through a simulation study we empirically compare our approach with other asymmetric and normal dimension reduction strategies for clustering. Finally, we demonstrate our methods using a sample of older adults with and without insomnia. The proposed MSN-based variable selection algorithm appears to be suitable for both MSN and multivariate normal cluster distributions, especially with moderate to large sample sizes.

Indexed as

InsomniaMixture ModelResearch Domain CriteriaSkewed Data

Identifiers

PMID31086426
PMCPMC6510512

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.