Evidence map›Paper›PMID 31086414›Full record

ArticlePLoS pathogens2019

Genome-wide screen identifies novel genes required for Borrelia burgdorferi survival in its Ixodes tick vector.

James P Phelan, Aurelie Kern, Meghan E Ramsey, Maureen E Lundt, Bijaya Sharma, Tao Lin, Lihui Gao, Steven J Norris, Jenny A Hyde, Jon T Skare and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Hitchhiker's Guide toJournal of bacteriology · 2024
    Review
  3. Review
  4. Article
  5. Towards modelling tick-virus interactions using the weakly pathogenicFrontiers in cellular and infection microbiology · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. A putative xanthine dehydrogenase is critical forMicrobiology (Reading, England) · 2023
    Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Evolutionary Genetics ofCurrent issues in molecular biology · 2021
    Review
  17. Interactions Between Ticks and Lyme Disease Spirochetes.Current issues in molecular biology · 2021
    Article
  18. Review
  19. Lyme Disease Pathogenesis.Current issues in molecular biology · 2021
    Review
  20. Genetic Manipulation ofCurrent issues in molecular biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

James P PhelanDepartment of Molecular Biology and Microbiology, Tufts University, Boston, Massachusetts, United States of America.ORCID 0000-0001-6177-5211
Aurelie KernDepartment of Molecular Biology and Microbiology, Tufts University, Boston, Massachusetts, United States of America.
Meghan E RamseyDepartment of Molecular Biology and Microbiology, Tufts University, Boston, Massachusetts, United States of America.
Maureen E LundtDepartment of Molecular Biology and Microbiology, Tufts University, Boston, Massachusetts, United States of America.
Bijaya SharmaDepartment of Molecular Biology and Microbiology, Tufts University, Boston, Massachusetts, United States of America.ORCID 0000-0003-3432-1876
Tao LinDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, United States of America.
Lihui GaoMD Anderson Cancer Center Thoracic & Cardiovascular Surgery, Houston, Texas, United States of America.
Steven J NorrisDepartment of Pathology and Laboratory Medicine, McGovern Medical School at UT Health, Houston, Texas, United States of America.ORCID 0000-0002-2501-8034
Jenny A HydeDepartment of Microbial Pathogenesis and Immunology, Texas A & M University Health Science Center, Bryan, Texas, United States of America.ORCID 0000-0001-9442-9980
Jon T SkareDepartment of Microbial Pathogenesis and Immunology, Texas A & M University Health Science Center, Bryan, Texas, United States of America.
Linden T HuDepartment of Molecular Biology and Microbiology, Tufts University, Boston, Massachusetts, United States of America.ORCID 0000-0003-1659-5558
Tufts University · USTexas A&M Health Science Center · USBaylor College of Medicine · USThe University of Texas Health Science Center at Houston · USThe University of Texas MD Anderson Cancer Center · US

Funding

MOLECULAR ANALYSIS OF MICROBIAL PATHOGENST32AI007422 · NIAID · TUFTS UNIVERSITY BOSTON · PI Ralph R. Isberg · 1992 to 2026
$5.7M
Virulence Determinants of Borrelia burgdorferiR01AI059048 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI NORRIS, STEVEN J. · 2004 to 2016
$5.3M
Development and Field Testing of a Novel Reservoir Targeted Antibiotic Against Borrelia burgdorferiR01AI152210 · NIAID · TUFTS UNIVERSITY BOSTON · PI HU, LINDEN T, LEWIS, KIM · 2020 to 2025
$3.9M
Coping with Stress: Next Generation Approaches to Borrelia burgdorferi Host AdaptationR01AI131656 · NIAID · TUFTS UNIVERSITY BOSTON · PI HU, LINDEN T, SKARE, JON T · 2017 to 2021
$3.3M
Role of carbon availability in environmental adaptation by Borrelia burgdorferiR21AI111317 · NIAID · TUFTS UNIVERSITY BOSTON · PI HU, LINDEN T, LIN, TAO · 2015 to 2016
$475k
Use of massively parallel sequencing for identification of B. burgdorferi virulenR21AI103905 · NIAID · TUFTS MEDICAL CENTER · PI HU, LINDEN T, LIN, TAO · 2013 to 2014
$433k
Defining B. burgdorferi oxidative stress responses by next-generation sequencingF32AI118316 · NIAID · TUFTS UNIVERSITY BOSTON · PI RAMSEY, MEGHAN E · 2015 to 2016
$110k
NIAID NIH HHS F32 AI118316NIAID NIH HHS R01 AI059048NIAID NIH HHS R01 AI131656NIAID NIH HHS R01 AI152210NIAID NIH HHS R21 AI103905NIAID NIH HHS R21 AI111317NIAID NIH HHS T32 AI007422
6 · The paper itself

Abstract

Borrelia burgdorferi, the causative agent of Lyme disease in humans, is maintained in a complex biphasic life cycle, which alternates between tick and vertebrate hosts. To successfully survive and complete its enzootic cycle, B. burgdorferi adapts to diverse hosts by regulating genes required for survival in specific environments. Here we describe the first ever use of transposon insertion sequencing (Tn-seq) to identify genes required for B. burgdorferi survival in its tick host. We found that insertions into 46 genes resulted in a complete loss of recovery of mutants from larval Ixodes ticks. Insertions in an additional 56 genes resulted in a >90% decrease in fitness. The screen identified both previously known and new genes important for larval tick survival. Almost half of the genes required for survival in the tick encode proteins of unknown function, while a significant portion (over 20%) encode membrane-associated proteins or lipoproteins. We validated the results of the screen for five Tn mutants by performing individual competition assays using mutant and complemented strains. To better understand the role of one of these genes in tick survival, we conducted mechanistic studies of bb0017, a gene previously shown to be required for resistance against oxidative stress. In this study we show that BB0017 affects the regulation of key borrelial virulence determinants. The application of Tn-seq to in vivo screening of B. burgdorferi in its natural vector is a powerful tool that can be used to address many different aspects of the host pathogen interaction.

Indexed as

DNA Transposable ElementsGene Expression Regulation, BacterialAnimalsBacterial ProteinsBorrelia burgdorferiDisease Models, AnimalDisease VectorsHigh-Throughput Nucleotide SequencingHost-Pathogen InteractionsLyme DiseaseMiceTicksVirulence FactorsBacterial ProteinsDNA Transposable ElementsVirulence Factors

Identifiers

PMID31086414
PMCPMC6516651
OpenAlexW2945908281

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.