ArticlePloS one2019
Genome wide association analysis of sorghum mini core lines regarding anthracnose, downy mildew, and head smut.
Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
20 citing papers in PubMed.
- Genomic Analysis of Resistance toPathogens (Basel, Switzerland) · 2026Article
- A machine learning approach to genome-wide association mapping of disease resistance and geographic origin in sorghum.BMC plant biology · 2026Article
- Machine learning reveals complex genetics of fungal resistance in sorghum grain mold.Heredity · 2025Article
- Identification of candidate single-nucleotide polymorphisms (SNPs) and genes associated with sugarcane leaf scald disease.Scientific reports · 2024Article
- Genome-Wide Association Analysis Uncovers Genes Associated with Resistance to Head Smut Pathotype 5 in Senegalese Sorghum Accessions.Plants (Basel, Switzerland) · 2024Article
- Pathotype determination of sorghum anthracnose (Frontiers in microbiology · 2024Article
- Pilot-scale genome-wide association mapping in diverse sorghum germplasms identified novel genetic loci linked to major agronomic, root and stomatal traits.Scientific reports · 2023Article
- Multi-Trait Genome-Wide Association Studies ofPathogens (Basel, Switzerland) · 2023Article
- Inoculation and Screening Methods for Major Sorghum Diseases Caused by Fungal Pathogens:Plants (Basel, Switzerland) · 2023Review
- Recent advancements in the breeding of sorghum crop: current status and future strategies for marker-assisted breeding.Frontiers in genetics · 2023Review
- A Genome-Wide Association Study of Senegalese Sorghum Seedlings Responding to Pathotype 5 ofPlants (Basel, Switzerland) · 2022Article
- Genetic mapping of sorghum resistance to an Illinois isolate of Colletotrichum sublineola.The plant genome · 2022Article
- Genome-wide association study of Senegalese sorghum seedlings responding to a Texas isolate of Colletotrichum sublineola.Scientific reports · 2022Article
- Two decades of association mapping: Insights on disease resistance in major crops.Frontiers in plant science · 2022Review
- Selection Signatures in Chinese Sorghum Reveals Its Unique Liquor-Making Properties.Frontiers in plant science · 2022Article
- Sorghum genetic, genomic, and breeding resources.Planta · 2021Review
- Genome-wide association analysis for response of Senegalese sorghum accessions to Texas isolates of anthracnose.The plant genome · 2021Article
- The Sorghum Grain Mold Disease Complex: Pathogens, Host Responses, and the Bioactive Metabolites at Play.Frontiers in plant science · 2021Review
- Genome-wide association analysis of anthracnose resistance in sorghum [Sorghum bicolor (L.) Moench].PloS one · 2021Article
- RNA-Sequencing in Resistant (QL3) and Susceptible (Theis) Sorghum Cultivars Inoculated With Johnsongrass Isolates ofFrontiers in genetics · 2021Article
Corrections and comments
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Authors and funding
7 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In previous studies, a sorghum mini core collection was scored over several years for response to Colletotrichum sublineola, Peronosclerospora sorghi, and Sporisorium reilianum, the causal agents of the disease anthracnose, downy mildew, and head smut, respectively. The screening results were combined with over 290,000 Single nucleotide polymorphic (SNP) loci from an updated version of a publicly available genotype by sequencing (GBS) dataset available for the mini core collection. GAPIT (Genome Association and Prediction Integrated Tool) R package was used to identify chromosomal locations that differ in disease response. When the top scoring SNPs were mapped to the most recent version of the published sorghum genome, in each case, a nearby and most often the closest annotated gene has precedence for a role in host defense.
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