Evidence map›Paper›PMID 31086367›Full record

ArticlePLoS genetics2019

Developmental fidelity is imposed by genetically separable RalGEF activities that mediate opposing signals.

Hanna Shin, Christian Braendle, Kimberly B Monahan, Rebecca E W Kaplan, Tanya P Zand, Francisca Sefakor Mote, Eldon C Peters, David J Reiner

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. RAP-2-independent roles formicroPublication biology · 2026
    Article
  4. Article
  5. Article
  6. RAL-1 signaling regulates lipid composition inmicroPublication biology · 2024
    Article
  7. Article
  8. A signalling cascade for Ral.Small GTPases · 2022
    Review
  9. Article
  10. Article
  11. Ras, Ral, and Rap1 in C. elegans.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  12. Insulated Switches: Dual-Function Protein RalGEFInternational journal of molecular sciences · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Hanna ShinInstitute of Biosciences and Technology, Texas A&M Health Science Center, Texas A&M University, Houston, TX, United States of America.
Christian BraendleUniversité Côte d'Azur, CNRS, Inserm, IBV, Nice, France.ORCID 0000-0003-0203-4581
Kimberly B MonahanLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, United States of America.
Rebecca E W KaplanLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, United States of America.
Tanya P ZandLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, United States of America.ORCID 0000-0001-8729-5849
Francisca Sefakor MoteInstitute of Biosciences and Technology, Texas A&M Health Science Center, Texas A&M University, Houston, TX, United States of America.
Eldon C PetersLineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, NC, United States of America.
David J ReinerInstitute of Biosciences and Technology, Texas A&M Health Science Center, Texas A&M University, Houston, TX, United States of America.ORCID 0000-0002-0344-7161
University of North Carolina at Chapel Hill · USTexas A&M Health Science Center · USCentre National de la Recherche Scientifique · FR

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Novel signals regulate cell fate patterning - Equipment SupplementR01GM121625 · NIGMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI REINER, DAVID · 2017 to 2020
$1.4M
NIGMS NIH HHS R01 GM121625NIH HHS P40 OD010440
6 · The paper itself

Abstract

The six C. elegans vulval precursor cells (VPCs) are induced to form the 3°-3°-2°-1°-2°-3° pattern of cell fates with high fidelity. In response to EGF signal, the LET-60/Ras-LIN-45/Raf-MEK-2/MEK-MPK-1/ERK canonical MAP kinase cascade is necessary to induce 1° fate and synthesis of DSL ligands for the lateral Notch signal. In turn, LIN-12/Notch receptor is necessary to induce neighboring cells to become 2°. We previously showed that, in response to graded EGF signal, the modulatory LET-60/Ras-RGL-1/RalGEF-RAL-1/Ral signal promotes 2° fate in support of LIN-12. In this study, we identify two key differences between RGL-1 and RAL-1. First, deletion of RGL-1 confers no overt developmental defects, while previous studies showed RAL-1 to be essential for viability and fertility. From this observation, we hypothesize that the essential functions of RAL-1 are independent of upstream activation. Second, RGL-1 plays opposing and genetically separable roles in VPC fate patterning. RGL-1 promotes 2° fate via canonical GEF-dependent activation of RAL-1. Conversely, RGL-1 promotes 1° fate via a non-canonical GEF-independent activity. Our genetic epistasis experiments are consistent with RGL-1 functioning in the modulatory 1°-promoting AGE-1/PI3-Kinase-PDK-1-AKT-1 cascade. Additionally, animals lacking RGL-1 experience 15-fold higher rates of VPC patterning errors compared to the wild type. Yet VPC patterning in RGL-1 deletion mutants is not more sensitive to environmental perturbations. We propose that RGL-1 functions to orchestrate opposing 1°- and 2°-promoting modulatory cascades to decrease developmental stochasticity. We speculate that such switches are broadly conserved but mostly masked by paralog redundancy or essential functions.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsBody PatterningCaenorhabditis elegansCaenorhabditis elegans ProteinsEpidermal Growth FactorEpistasis, GeneticFemaleFertilityGuanine Nucleotide Exchange Factorsraf Kinasesral GTP-Binding Proteinsras ProteinsReceptors, NotchSignal TransductionStem CellsCaenorhabditis elegans ProteinsEpidermal Growth FactorGuanine Nucleotide Exchange Factorslet-60 protein, C elegansLin-12 protein, C eleganslin-45 protein, C elegansraf KinasesRAL-1 protein, C elegansral GTP-Binding Proteinsras ProteinsReceptors, Notch

Identifiers

PMID31086367
PMCPMC6534338
OpenAlexW2946266714

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.