Evidence map›Paper›PMID 31086239›Full record

ArticleScientific reports2019

Apicoplast phylogeny reveals the position of Plasmodium vivax basal to the Asian primate malaria parasite clade.

Nobuko Arisue, Tetsuo Hashimoto, Satoru Kawai, Hajime Honma, Keitaro Kume, Toshihiro Horii

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. To quest new targets ofJournal of parasitic diseases : official organ of the Indian Society for Parasitology · 2024
    Review
  4. Review
  5. Article
  6. The African origin of Plasmodium vivax.FEMS microbiology reviews · 2022
    Article
  7. Review
  8. Article
  9. Article
  10. Ape Origins of Human Malaria.Annual review of microbiology · 2020
    Review
  11. Clinical microbiology reviews · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Nobuko ArisueDepartment of Molecular Protozoology, Research Institute for Microbial Diseases, Osaka University, Osaka, 565-0871, Japan. arisue@biken.osaka-u.ac.jp.
Tetsuo HashimotoGraduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan.
Satoru KawaiLaboratory of Tropical Medicine and Parasitology, Dokkyo Medical University, Tochigi, 321-0293, Japan.
Hajime HonmaDepartment of International Affairs and Tropical Medicine, Tokyo Women's Medical University, Tokyo, 162-8666, Japan.
Keitaro KumeGraduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, 305-8572, Japan.
Toshihiro HoriiDepartment of Molecular Protozoology, Research Institute for Microbial Diseases, Osaka University, Osaka, 565-0871, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The malaria parasite species, Plasmodium vivax infects not only humans, but also African apes. Human specific P. vivax has evolved from a single ancestor that originated from a parasite of African apes. Although previous studies have proposed phylogenetic trees positioning P. vivax (the common ancestor of human and African ape P. vivax) within the assemblages of Asian primate parasites, its position has not yet been robustly confirmed. We determined nearly complete apicoplast genome sequences from seven Asian primate parasites, Plasmodium cynomolgi (strains Ceylonensis and Berok), P. knowlesi P. fragile, P. fieldi, P. simiovale, P. hylobati, P. inui, and an African primate parasite, P. gonderi, that infects African guenon. Phylogenetic relationships of the Plasmodium species were analyzed using newly and previously determined apicoplast genome sequences. Multigene maximum likelihood analysis of 30 protein coding genes did not position P. vivax within the Asian primate parasite clade but positioned it basal to the clade, after the branching of an African guenon parasite, P. gonderi. The result does not contradict with the emerging notion that P. vivax phylogenetically originated from Africa. The result is also supported by phylogenetic analyses performed using massive nuclear genome data of seven primate Plasmodium species.

Indexed as

AfricaAnimalsApicoplastsAsiaGenes, ProtozoanGenome, ProtozoanHumansMalaria, VivaxPhylogenyPlasmodiumPlasmodium cynomolgiPlasmodium knowlesiPlasmodium vivaxPrimate DiseasesPrimates

Identifiers

PMID31086239
PMCPMC6514274

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.