Evidence map›Paper›PMID 31086232›Full record

ArticleScientific reports2019

Divergently expressed RNA identification and interaction prediction of long non-coding RNA and mRNA involved in Hu sheep hair follicle.

Xiaoyang Lv, Wen Gao, Chengyan Jin, Yue Wang, Weihao Chen, Lihong Wang, Shuangxia Zou, Shuixing Sheng, Ling Chen, Wei Sun

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 43% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Xiaoyang LvCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, Jiangsu, P.R. China.
Wen GaoCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, Jiangsu, P.R. China.
Chengyan JinCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, Jiangsu, P.R. China.
Yue WangCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, Jiangsu, P.R. China.
Weihao ChenCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, Jiangsu, P.R. China.
Lihong WangCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, Jiangsu, P.R. China.
Shuangxia ZouCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, Jiangsu, P.R. China.
Shuixing ShengAnimal Science and Veterinary Medicine Bureau of Suzhou City, Suzhou, 215200, Jiangsu, P.R. China.
Ling ChenAnimal Science and Veterinary Medicine Bureau of Suzhou City, Suzhou, 215200, Jiangsu, P.R. China.
Wei SunCollege of Animal Science and Technology, Yangzhou University, Yangzhou, 225009, Jiangsu, P.R. China. dkxmsunwei@163.com.
Yangzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hair follicles are the basis of the formation of Hu sheep pattern. This study was to employ whole transcriptome sequencing to screen differentially expressed long non-coding RNAs (lncRNAs) between three wave patterns in lambskin. In this study, three groups of 2-day-old Hu sheep were selected from full-sib individuals that included small, medium, and large waves, and hair follicle tissues were collected from dorsal side of Hu sheep. LncRNA and mRNA expression profiles were analyzed by whole transcriptome sequencing technology. 33, 31, and 41 differentially expressed lncRNAs were selected between large and medium, medium and small, and large and small, respectively. 458, 481, and 498 differentially expressed mRNAs were found between large and medium, medium and small, and large and small, respectively, by RNA-seq analysis. qRT-PCR results of 16 randomly selected lncRNAs and mRNAs were similar to the sequencing results. Correlation analysis of lncRNA and mRNA expression showed that, several lncRNAs may be enriched for hair follicle such as Wnt, mTOR, Notch signaling pathways. Our results aid in excavation of mRNAs and lncRNAs in hair follicle, and providing a basis for future study on pattern formation mechanisms.

Indexed as

AnimalsExome SequencingHair FollicleReal-Time Polymerase Chain ReactionRNARNA, Long NoncodingRNA, MessengerSheepRNARNA, Long NoncodingRNA, Messenger

Identifiers

PMID31086232
PMCPMC6514014
OpenAlexW2945853940

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.