Evidence map›Paper›PMID 31086108›Full record

ArticleInternational journal of molecular sciences2019

A Robust Model for Circadian Redox Oscillations.

Marta Del Olmo, Achim Kramer, Hanspeter Herzel

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Review
  3. The redox rhythm gates immune-induced cell death distinctly from the genetic clock.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Pitfalls of Mitochondrial Redox Signaling Research.Antioxidants (Basel, Switzerland) · 2023
    Review
  10. Article
  11. Perfecting the Life Clock: The Journey from PTO to TTFL.International journal of molecular sciences · 2023
    Review
  12. Review
  13. Article
  14. Nonlinear phenomena in models of the circadian clock.Journal of the Royal Society, Interface · 2020
    Article
  15. Review
  16. Molecular Interactions between Pathogens and the Circadian Clock.International journal of molecular sciences · 2019
    Review
  17. An Inactivation Switch Enables Rhythms in aInternational journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Marta Del OlmoInstitute for Theoretical Biology, Charité and Humboldt-Universität zu Berlin, 10115 Berlin, Germany. marta.del-olmo@charite.de.ORCID 0000-0001-6530-4628
Achim KramerLaboratory of Chronobiology, Charité-Universitätsmedizin Berlin, 10117 Berlin, Germany. achim.kramer@charite.de.
Hanspeter HerzelInstitute for Theoretical Biology, Charité and Humboldt-Universität zu Berlin, 10115 Berlin, Germany. h.herzel@biologie.hu-berlin.de.ORCID 0000-0003-0414-7889
Humboldt-Universität zu Berlin · DECharité - Universitätsmedizin Berlin · DE

Funding

Deutsche Forschungsgemeinschaft A17 278001972 - TRR 186Deutsche Forschungsgemeinschaft GRK 1772Integrative Research Institute for the Life Sciences Humboldt Universität zu Berlin
6 · The paper itself

Abstract

The circadian clock is an endogenous oscillator that controls daily rhythms in metabolism, physiology, and behavior. Although the timekeeping components differ among species, a common design principle is a transcription-translation negative feedback loop. However, it is becoming clear that other mechanisms can contribute to the generation of 24 h rhythms. Peroxiredoxins (Prxs) exhibit 24 h rhythms in their redox state in all kingdoms of life. In mammalian adrenal gland, heart and brown adipose tissue, such rhythms are generated as a result of an inactivating hyperoxidation reaction that is reduced by coordinated import of sulfiredoxin (Srx) into the mitochondria. However, a quantitative description of the Prx/Srx oscillating system is still missing. We investigate the basic principles that generate mitochondrial Prx/Srx rhythms using computational modeling. We observe that the previously described delay in mitochondrial Srx import, in combination with an appropriate separation of fast and slow reactions, is sufficient to generate robust self-sustained relaxation-like oscillations. We find that our conceptual model can be regarded as a series of three consecutive phases and two temporal switches, highlighting the importance of delayed negative feedback and switches in the generation of oscillations.

Indexed as

AnimalsCircadian ClocksCircadian RhythmComputer SimulationHumansModels, TheoreticalOxidation-ReductionPeroxiredoxinsSignal TransductionPeroxiredoxinsfast vs. slow reactionsmathematical modelingnegative feedbackoscillationsphasesredoxswitches

Identifiers

PMID31086108
PMCPMC6539027
OpenAlexW2953165435

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.