Evidence map›Paper›PMID 31085692›Full record

ArticleJournal of bacteriology2019

A Mutagenic Screen Identifies a TonB-Dependent Receptor Required for the Lanthanide Metal Switch in the Type I Methanotroph "Methylotuvimicrobium buryatense" 5GB1C.

Joseph D Groom, Stephanie M Ford, Mitchell W Pesesky, Mary E Lidstrom

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Methanotroph Methylotuvimicrobium alcaliphilum 20Z-3E as a fumarate producer: transcriptomic analysis and the role of malic enzyme.International microbiology : the official journal of the Spanish Society for Microbiology · 2025
    Article
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  8. Review
  9. Article
  10. Cre/Applied and environmental microbiology · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Multispecies Populations of MethanotrophicApplied and environmental microbiology · 2022
    Article
  15. Optimized Tools and Methods for Methanotroph Genome Editing.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Joseph D GroomDepartment of Chemical Engineering, University of Washington, Seattle, Washington, USA groomjd@uw.edu.
Stephanie M FordDepartment of Chemical Engineering, University of Washington, Seattle, Washington, USA.
Mitchell W PeseskyDepartment of Chemical Engineering, University of Washington, Seattle, Washington, USA.
Mary E LidstromDepartment of Chemical Engineering, University of Washington, Seattle, Washington, USA.
University of Washington · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several of the metabolic enzymes in methanotrophic bacteria rely on metals for both their expression and their catalysis. The MxaFI methanol dehydrogenase enzyme complex uses calcium as a cofactor to oxidize methanol, while the alternative methanol dehydrogenase XoxF uses lanthanide metals such as lanthanum and cerium for the same function. Lanthanide metals, abundant in the earth's crust, strongly repress the transcription of

Indexed as

Alcohol OxidoreductasesBacterial ProteinsBiological TransportGammaproteobacteriaGene Expression Regulation, BacterialLanthanoid Series ElementsMembrane ProteinsMethaneMutagenesisalcohol dehydrogenase (acceptor)Alcohol OxidoreductasesBacterial ProteinsLanthanoid Series ElementsMembrane ProteinsMethanetonB protein, Bacteriagene regulationgeneticslanthanidemethanol dehydrogenasemethanotrophsmutagenesis

Identifiers

PMID31085692
PMCPMC6620403
OpenAlexW2944659145

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.