Evidence map›Paper›PMID 31085655›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

CHD4 is essential for transcriptional repression and lineage progression in B lymphopoiesis.

Tessa Arends, Carissa Dege, Alexandra Bortnick, Thomas Danhorn, Jennifer R Knapp, Haiqun Jia, Laura Harmacek, Courtney J Fleenor, Desiree Straign, Kendra Walton and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 55 citations in OpenAlex.

  1. Review
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  4. Chromodomain helicase DNA-binding proteins and orofacial cleft.Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2026
    Review
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  11. How does CHD4 slide nucleosomes?Biochemical Society transactions · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 1 country.

Tessa ArendsProgram in Molecular Biology, University of Colorado Denver, Aurora, CO 80045.
Carissa DegeDepartment of Immunology and Microbiology, University of Colorado Denver, Aurora, CO 80045.
Alexandra BortnickSection of Molecular Biology, University of California, San Diego, La Jolla, CA 92093.
Thomas DanhornCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206.ORCID 0000-0002-3861-8602
Jennifer R KnappCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206.
Haiqun JiaDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037.
Laura HarmacekCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206.
Courtney J FleenorDepartment of Biomedical Research, National Jewish Health, Denver, CO 80206.
Desiree StraignDepartment of Biomedical Research, National Jewish Health, Denver, CO 80206.
Kendra WaltonCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206.
Sonia M LeachCenter for Genes, Environment, and Health, National Jewish Health, Denver, CO 80206.
Ann J FeeneyDepartment of Immunology and Microbial Science, The Scripps Research Institute, La Jolla, CA 92037.
Cornelis MurreSection of Molecular Biology, University of California, San Diego, La Jolla, CA 92093.
Brian P O'ConnorDepartment of Immunology and Microbiology, University of Colorado Denver, Aurora, CO 80045.
James R HagmanProgram in Molecular Biology, University of Colorado Denver, Aurora, CO 80045; hagmanj@njhealth.org.ORCID 0000-0002-5436-8455
National Jewish Health · USScripps Research Institute · USUniversity of California San Diego · USUniversity of Colorado Denver · US

Funding

Epigenetic Regulation of Altered T-cell Immunity in SarcoidosisR01HL127461 · NHLBI · NATIONAL JEWISH HEALTH · PI HAMZEH, NABEEL, O'CONNOR, BRIAN P · 2016 to 2019
$2.1M
Regulation of B Cell Development and Function by Zfp521R01AI098417 · NIAID · NATIONAL JEWISH HEALTH · PI HAGMAN, JAMES R. · 2012 to 2016
$2.0M
Regulation of B Cell Identity and Lineage ProgressionR01AI081878 · NIAID · NATIONAL JEWISH HEALTH · PI HAGMAN, JAMES R. · 2010 to 2014
$1.9M
E-proteins and EBF1 in B cell differentiationR01AI109599 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MURRE, CORNELIS · 2014 to 2017
$1.6M
Transcriptional heterogeneity within pro-B cellsR21AI107343 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI FEENEY, ANN J · 2013 to 2014
$504k
Regulation of V(D)J Recombination by Arginine MethylationR21AI115696 · NIAID · NATIONAL JEWISH HEALTH · PI HAGMAN, JAMES R. · 2015 to 2016
$436k
The 3D Genomes of Memory B cells and Plasma CellsF32GM106631 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BORTNICK, ALEXANDRA · 2014 to 2015
$106k
NHLBI NIH HHS R01 HL127461NIAID NIH HHS R01 AI081878NIAID NIH HHS R01 AI098417NIAID NIH HHS R01 AI109599NIAID NIH HHS R21 AI107343NIAID NIH HHS R21 AI115696NIGMS NIH HHS F32 GM106631
6 · The paper itself

Abstract

Cell lineage specification is a tightly regulated process that is dependent on appropriate expression of lineage and developmental stage-specific transcriptional programs. Here, we show that Chromodomain Helicase DNA-binding protein 4 (CHD4), a major ATPase/helicase subunit of Nucleosome Remodeling and Deacetylase Complexes (NuRD) in lymphocytes, is essential for specification of the early B cell lineage transcriptional program. In the absence of CHD4 in B cell progenitors in vivo, development of these cells is arrested at an early pro-B-like stage that is unresponsive to IL-7 receptor signaling and unable to efficiently complete V(D)J rearrangements at

Indexed as

AnimalsB-LymphocytesCell LineageChromatin Assembly and DisassemblyDNA HelicasesGene Expression RegulationLymphopoiesisMiceMice, TransgenicTranscription, GeneticDNA HelicasesMi-2beta protein, mouseB lymphocyte developmentB lymphopoiesischromatin remodeling complexestranscriptional programmingtranscriptional repression

Identifiers

PMID31085655
PMCPMC6561196
OpenAlexW2946438015

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.